| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054075
Identifier: 89054075
GI number: 89054075
Start: 1565661
End: 1566320
Strand: Direct
Name: 89054075
Synonym: Jann_1584
Alternate gene names: NA
Gene position: 1565661-1566320 (Clockwise)
Preceding gene: 89054074
Following gene: 89054077
Centisome position: 36.26
GC content: 59.7
Gene sequence:
>660_bases ATGACCACGATTGTAACACGGCTTTACGAAAACGCGGCCCATGCCGATGACGTTGTCGCGCACCTGAAAGCCGAGGGCTT CCCGGACGACACCATGGACGTGATCGAGCAAGGCACACGCACTTCCGCTGAAGACCGGATCGTTGAAGCTGGCGTGCCTG CCAACATCGCGCAGCAATATGCGCAGCACCTGTCCGTCGGGCGGGGTCTGCTGGTTGTCCGCGCCCCGTTTGTGCCGTTT GGCGCGGCCAAGACCGCGATTGAGGCGGCGGATATGCATCCGTCCTTCGATGCGGGCGTTACCAATGAGAACATCCATAC TCCGAAGGAATTTGATGACCGTCAGTACCTGTCGATCATGTCCAGTGACCGGCTGTTCCTGACGAATCGTCTGGATGTGG ATAACGGCCTGAAACCCCGCGGCTTTTCAGCGGCCTTTGGGGTGCCCACACTATCCTATCAGCATGAGCGCAAGCGGATG CGCCCGGCGGTGATGGACGCGCATTTCGGCAATTTCTTTGTCCCCCTGCTGTCGCGCCGGGGCCTGATGACCCGCCGACC GCTGACCGACAGGTTCTTCGGGAACTTTATCGTGCAGCATATCTCCAACTGGAGCTTCCTGCGTCCGTCGAAGATGCGGC ACTTCCGGATCACCAACTAG
Upstream 100 bases:
>100_bases GCACTCGAAATTTGGAGCACAAGCTCTAGCTTAATGAAATCGCAGTCCGATTGTGATACGGATTGCCACAATGTTCGGAA AACGGGGAGGCTCAGCTGAG
Downstream 100 bases:
>100_bases GCGCATCGCCTTCGTCTGATGTTTGGCCCTGCCGTCACTGGCGGGGCCGTTTCATTTGCGCATATCGGTCCGTCTTACCC GGGCGTCGGGCCCACGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTTIVTRLYENAAHADDVVAHLKAEGFPDDTMDVIEQGTRTSAEDRIVEAGVPANIAQQYAQHLSVGRGLLVVRAPFVPF GAAKTAIEAADMHPSFDAGVTNENIHTPKEFDDRQYLSIMSSDRLFLTNRLDVDNGLKPRGFSAAFGVPTLSYQHERKRM RPAVMDAHFGNFFVPLLSRRGLMTRRPLTDRFFGNFIVQHISNWSFLRPSKMRHFRITN
Sequences:
>Translated_219_residues MTTIVTRLYENAAHADDVVAHLKAEGFPDDTMDVIEQGTRTSAEDRIVEAGVPANIAQQYAQHLSVGRGLLVVRAPFVPF GAAKTAIEAADMHPSFDAGVTNENIHTPKEFDDRQYLSIMSSDRLFLTNRLDVDNGLKPRGFSAAFGVPTLSYQHERKRM RPAVMDAHFGNFFVPLLSRRGLMTRRPLTDRFFGNFIVQHISNWSFLRPSKMRHFRITN >Mature_218_residues TTIVTRLYENAAHADDVVAHLKAEGFPDDTMDVIEQGTRTSAEDRIVEAGVPANIAQQYAQHLSVGRGLLVVRAPFVPFG AAKTAIEAADMHPSFDAGVTNENIHTPKEFDDRQYLSIMSSDRLFLTNRLDVDNGLKPRGFSAAFGVPTLSYQHERKRMR PAVMDAHFGNFFVPLLSRRGLMTRRPLTDRFFGNFIVQHISNWSFLRPSKMRHFRITN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24703; Mature: 24572
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIVTRLYENAAHADDVVAHLKAEGFPDDTMDVIEQGTRTSAEDRIVEAGVPANIAQQY CHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHEEECCCCHHHHHHH AQHLSVGRGLLVVRAPFVPFGAAKTAIEAADMHPSFDAGVTNENIHTPKEFDDRQYLSIM HHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SSDRLFLTNRLDVDNGLKPRGFSAAFGVPTLSYQHERKRMRPAVMDAHFGNFFVPLLSRR CCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCHHHHHHCCCHHHHHHHHCC GLMTRRPLTDRFFGNFIVQHISNWSFLRPSKMRHFRITN CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC >Mature Secondary Structure TTIVTRLYENAAHADDVVAHLKAEGFPDDTMDVIEQGTRTSAEDRIVEAGVPANIAQQY HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHEEECCCCHHHHHHH AQHLSVGRGLLVVRAPFVPFGAAKTAIEAADMHPSFDAGVTNENIHTPKEFDDRQYLSIM HHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SSDRLFLTNRLDVDNGLKPRGFSAAFGVPTLSYQHERKRMRPAVMDAHFGNFFVPLLSRR CCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCHHHHHHCCCHHHHHHHHCC GLMTRRPLTDRFFGNFIVQHISNWSFLRPSKMRHFRITN CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA