Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054067

Identifier: 89054067

GI number: 89054067

Start: 1555984

End: 1558053

Strand: Reverse

Name: 89054067

Synonym: Jann_1576

Alternate gene names: NA

Gene position: 1558053-1555984 (Counterclockwise)

Preceding gene: 89054068

Following gene: 89054066

Centisome position: 36.08

GC content: 65.27

Gene sequence:

>2070_bases
ATGGTTTGGTCCTGGGGCACAGCAACGCGAATGGACGGGGGCGGAAAGGCCGCCACCGTGCAATCGCCCCAAAGCGACTG
GTGGCAGCGCATGTTGGCAGGCGATCTGCCGGACCATGTCCTGACGCCGGTGGATCGGGAGGTTTACACCGCCCATCCCG
ACGAGACGGCCCCCCTGTGTCGCCAGGCCGCCTGCACTGGTACGCGGGATGATCGCGGTGATGTCGCGCCCCTGCACGCC
CAGTCCGGCACCGTCATCATGGGCGTGATCGACGACGGATTAGCCTTTGCGAATGCGCGCTTCCTCAAGCCCGGTGATGA
TGGGCGCTATCAGACCCGCATGGCCGCGTTCTGGAACCAGGACGCCACCTGCGATGACACGCGCCCAACCCACGGCTATG
CCCTGCCCTTCGGTCAAGACTGGCTTGAGCAGGAGATCAACACAGACCTCTTCACCTACCAAGACGGCCCCTACCCCGAT
GCTGACGCCGCCTACCGCCTGTCCGGGATGTCGCGGGCGGTGGCGGGCGCTTTGCGTCATGGCACCCATGTGATGGATCT
GGCCACCGGCTATGATTGCGACGACACAACGCCCAATTCCTTGGGCGAGGTCCCATCCGATCTGGCGCTGCGCCGTCCCA
TCGTCGCCGTGCAACTGGCGCGCTATGCCACGCAAAACGCCTCCGGCGCGTTCATGGCCCCGTTCGTGACCCATGCGATG
ACGTATATCCTTGACCGTGCCGTGCGCTTGCAGCCCGAGACCGGGGATCGCGTGCCCGTGGTCCTCAACTTCTCCTACGG
GATATACGCCAGCGCCCTGAATGGCCGCGCGGCGATAGAAGAATGGATCGACGATGCCGTGAAGGCCATGTGGCGTGACC
ACGGCATTCCGGTCTGGGTCGTGCTGCCTGCGGGCAACAGCCACATGGACCGCACCCATGGGCAGCTGGAGGCCGGCGCG
ACCCGGCCTGCATCCCACACACCGCCGCTGATCCTGCGGCATCCCCCTGAAAACAAAGCACCCACCGTGGTCGAAATCTG
GTGGCCGGAACGCACCACCAGCCTGAAGACCTACGGGTTGGAGAGGGTGAAGGGCGCCAAGGGCGGGCTGAATGCCAAGG
ACCGTAGGCAAGTCATCGAGTTGCTGTCTGCCCTGCCCTCCCCTCTCCGACTGGAATTGCGCCCGCCGATGGCCACGGAC
TGGATCGAGGTTCCGCCGGATGCGGTGAACTTCTTTCACGGCGTGCCGTTGCAAGACGGCGATCGTACGCTGGCGATGAC
CTATCACGAGGCGCTGGCGAGCTTTGGTCGCAAGACCATGGATACCGATGAACACACCGTAAGCGTGCAGTTGAAACTGA
CGCTGATCCTGTCGCCTGCGGCTTTTGAGCAACCGATCAAGGACCCCGCCTTCGCCTGGACCGAGGCCACCCTGCCCGCA
GGCGATTGGCACCTGCGCGTGTGGAATGAAGATACGGACGCCGCTGAGAGTGTGACCGTCCGCTGCCAGCGCAACGATAC
CCCCTTCGGCTTCCGCCCGTTTGGCCGCCAATCCCGGCTGGAAGATGTGGATTACCGCGAGGTGCGCCCCGACGGCCGCG
CGGATCAGGACGACAATGATGCTGCGTGGGTCCTGAAACGCGGCACCACGAATGCCATCGGGTCCGGCGCACATACCACC
CGCGTGGGCTCCGTCCGCGTCGCCAATGTCACCCGGCGCGATGTGCCCACGAATGACGTGACCGCCGCATCGGTCTTCAG
CTCTGCCGGGGATCCCGCAAACCCGCGCGACGGCGTCGATATTGCCGCTGCCTCCGAGGTCAGCGCGGCCCTGCCCGGCG
TGATGGCTGCGGGCACCCATTCCGGCTCCGCGTTCCGGCTGTCGGGCACGTCTGCGTCGGCCCCACAAGTGGCCCGCTGG
ATCGCCCAGGAACTGGCCCGCCCCGGCATCCCGCCCCTCCGCGACGCCCTGATCGCAGAGGCCGAGAATTCAACCGCAAC
CTACTTTTCAGACAGTTACTTTCCCGAGCGTACAGGCGCTCGCATCTTATTCGGACCCGGTGCTCGTTAA

Upstream 100 bases:

>100_bases
CTGCAAACGCACCCCGCGACGCTGGCCCTGACGCAGCTGTATAAACTGGCCAAGGGCGAGTGGACGACGGGCGTTGCGCC
CACGGCGCAGGGATAGAGCC

Downstream 100 bases:

>100_bases
TTCCAGTGGAGCATCGGAAAAAGGACGTGTGTCCCTCTTCCCGCACGTCTTTTATCCGCCCGGCAGCCATCCCCTTGGCT
GTCGGGCAATTTCTTTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 689; Mature: 689

Protein sequence:

>689_residues
MVWSWGTATRMDGGGKAATVQSPQSDWWQRMLAGDLPDHVLTPVDREVYTAHPDETAPLCRQAACTGTRDDRGDVAPLHA
QSGTVIMGVIDDGLAFANARFLKPGDDGRYQTRMAAFWNQDATCDDTRPTHGYALPFGQDWLEQEINTDLFTYQDGPYPD
ADAAYRLSGMSRAVAGALRHGTHVMDLATGYDCDDTTPNSLGEVPSDLALRRPIVAVQLARYATQNASGAFMAPFVTHAM
TYILDRAVRLQPETGDRVPVVLNFSYGIYASALNGRAAIEEWIDDAVKAMWRDHGIPVWVVLPAGNSHMDRTHGQLEAGA
TRPASHTPPLILRHPPENKAPTVVEIWWPERTTSLKTYGLERVKGAKGGLNAKDRRQVIELLSALPSPLRLELRPPMATD
WIEVPPDAVNFFHGVPLQDGDRTLAMTYHEALASFGRKTMDTDEHTVSVQLKLTLILSPAAFEQPIKDPAFAWTEATLPA
GDWHLRVWNEDTDAAESVTVRCQRNDTPFGFRPFGRQSRLEDVDYREVRPDGRADQDDNDAAWVLKRGTTNAIGSGAHTT
RVGSVRVANVTRRDVPTNDVTAASVFSSAGDPANPRDGVDIAAASEVSAALPGVMAAGTHSGSAFRLSGTSASAPQVARW
IAQELARPGIPPLRDALIAEAENSTATYFSDSYFPERTGARILFGPGAR

Sequences:

>Translated_689_residues
MVWSWGTATRMDGGGKAATVQSPQSDWWQRMLAGDLPDHVLTPVDREVYTAHPDETAPLCRQAACTGTRDDRGDVAPLHA
QSGTVIMGVIDDGLAFANARFLKPGDDGRYQTRMAAFWNQDATCDDTRPTHGYALPFGQDWLEQEINTDLFTYQDGPYPD
ADAAYRLSGMSRAVAGALRHGTHVMDLATGYDCDDTTPNSLGEVPSDLALRRPIVAVQLARYATQNASGAFMAPFVTHAM
TYILDRAVRLQPETGDRVPVVLNFSYGIYASALNGRAAIEEWIDDAVKAMWRDHGIPVWVVLPAGNSHMDRTHGQLEAGA
TRPASHTPPLILRHPPENKAPTVVEIWWPERTTSLKTYGLERVKGAKGGLNAKDRRQVIELLSALPSPLRLELRPPMATD
WIEVPPDAVNFFHGVPLQDGDRTLAMTYHEALASFGRKTMDTDEHTVSVQLKLTLILSPAAFEQPIKDPAFAWTEATLPA
GDWHLRVWNEDTDAAESVTVRCQRNDTPFGFRPFGRQSRLEDVDYREVRPDGRADQDDNDAAWVLKRGTTNAIGSGAHTT
RVGSVRVANVTRRDVPTNDVTAASVFSSAGDPANPRDGVDIAAASEVSAALPGVMAAGTHSGSAFRLSGTSASAPQVARW
IAQELARPGIPPLRDALIAEAENSTATYFSDSYFPERTGARILFGPGAR
>Mature_689_residues
MVWSWGTATRMDGGGKAATVQSPQSDWWQRMLAGDLPDHVLTPVDREVYTAHPDETAPLCRQAACTGTRDDRGDVAPLHA
QSGTVIMGVIDDGLAFANARFLKPGDDGRYQTRMAAFWNQDATCDDTRPTHGYALPFGQDWLEQEINTDLFTYQDGPYPD
ADAAYRLSGMSRAVAGALRHGTHVMDLATGYDCDDTTPNSLGEVPSDLALRRPIVAVQLARYATQNASGAFMAPFVTHAM
TYILDRAVRLQPETGDRVPVVLNFSYGIYASALNGRAAIEEWIDDAVKAMWRDHGIPVWVVLPAGNSHMDRTHGQLEAGA
TRPASHTPPLILRHPPENKAPTVVEIWWPERTTSLKTYGLERVKGAKGGLNAKDRRQVIELLSALPSPLRLELRPPMATD
WIEVPPDAVNFFHGVPLQDGDRTLAMTYHEALASFGRKTMDTDEHTVSVQLKLTLILSPAAFEQPIKDPAFAWTEATLPA
GDWHLRVWNEDTDAAESVTVRCQRNDTPFGFRPFGRQSRLEDVDYREVRPDGRADQDDNDAAWVLKRGTTNAIGSGAHTT
RVGSVRVANVTRRDVPTNDVTAASVFSSAGDPANPRDGVDIAAASEVSAALPGVMAAGTHSGSAFRLSGTSASAPQVARW
IAQELARPGIPPLRDALIAEAENSTATYFSDSYFPERTGARILFGPGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75050; Mature: 75050

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWSWGTATRMDGGGKAATVQSPQSDWWQRMLAGDLPDHVLTPVDREVYTAHPDETAPLC
CEECCCCCEEECCCCCEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCEEECCCCCHHHHH
RQAACTGTRDDRGDVAPLHAQSGTVIMGVIDDGLAFANARFLKPGDDGRYQTRMAAFWNQ
HHHHCCCCCCCCCCCCEEECCCCCEEEEEECCCEECCCCEEECCCCCCCHHHHHHHHHCC
DATCDDTRPTHGYALPFGQDWLEQEINTDLFTYQDGPYPDADAAYRLSGMSRAVAGALRH
CCCCCCCCCCCCEECCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
GTHVMDLATGYDCDDTTPNSLGEVPSDLALRRPIVAVQLARYATQNASGAFMAPFVTHAM
CCEEEEECCCCCCCCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
TYILDRAVRLQPETGDRVPVVLNFSYGIYASALNGRAAIEEWIDDAVKAMWRDHGIPVWV
HHHHHHHHEECCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEE
VLPAGNSHMDRTHGQLEAGATRPASHTPPLILRHPPENKAPTVVEIWWPERTTSLKTYGL
EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHCH
ERVKGAKGGLNAKDRRQVIELLSALPSPLRLELRPPMATDWIEVPPDAVNFFHGVPLQDG
HHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHCCCCCCCC
DRTLAMTYHEALASFGRKTMDTDEHTVSVQLKLTLILSPAAFEQPIKDPAFAWTEATLPA
CCEEEHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCHHHHCCCCCCCCEEECCCCCC
GDWHLRVWNEDTDAAESVTVRCQRNDTPFGFRPFGRQSRLEDVDYREVRPDGRADQDDND
CCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
AAWVLKRGTTNAIGSGAHTTRVGSVRVANVTRRDVPTNDVTAASVFSSAGDPANPRDGVD
EEEEEECCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
IAAASEVSAALPGVMAAGTHSGSAFRLSGTSASAPQVARWIAQELARPGIPPLRDALIAE
EEEHHHHHHHCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
AENSTATYFSDSYFPERTGARILFGPGAR
CCCCCEEEECCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MVWSWGTATRMDGGGKAATVQSPQSDWWQRMLAGDLPDHVLTPVDREVYTAHPDETAPLC
CEECCCCCEEECCCCCEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCEEECCCCCHHHHH
RQAACTGTRDDRGDVAPLHAQSGTVIMGVIDDGLAFANARFLKPGDDGRYQTRMAAFWNQ
HHHHCCCCCCCCCCCCEEECCCCCEEEEEECCCEECCCCEEECCCCCCCHHHHHHHHHCC
DATCDDTRPTHGYALPFGQDWLEQEINTDLFTYQDGPYPDADAAYRLSGMSRAVAGALRH
CCCCCCCCCCCCEECCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
GTHVMDLATGYDCDDTTPNSLGEVPSDLALRRPIVAVQLARYATQNASGAFMAPFVTHAM
CCEEEEECCCCCCCCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
TYILDRAVRLQPETGDRVPVVLNFSYGIYASALNGRAAIEEWIDDAVKAMWRDHGIPVWV
HHHHHHHHEECCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEE
VLPAGNSHMDRTHGQLEAGATRPASHTPPLILRHPPENKAPTVVEIWWPERTTSLKTYGL
EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHCH
ERVKGAKGGLNAKDRRQVIELLSALPSPLRLELRPPMATDWIEVPPDAVNFFHGVPLQDG
HHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHCCCCCCCC
DRTLAMTYHEALASFGRKTMDTDEHTVSVQLKLTLILSPAAFEQPIKDPAFAWTEATLPA
CCEEEHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCHHHHCCCCCCCCEEECCCCCC
GDWHLRVWNEDTDAAESVTVRCQRNDTPFGFRPFGRQSRLEDVDYREVRPDGRADQDDND
CCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
AAWVLKRGTTNAIGSGAHTTRVGSVRVANVTRRDVPTNDVTAASVFSSAGDPANPRDGVD
EEEEEECCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
IAAASEVSAALPGVMAAGTHSGSAFRLSGTSASAPQVARWIAQELARPGIPPLRDALIAE
EEEHHHHHHHCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
AENSTATYFSDSYFPERTGARILFGPGAR
CCCCCEEEECCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA