| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054030
Identifier: 89054030
GI number: 89054030
Start: 1509358
End: 1511145
Strand: Direct
Name: 89054030
Synonym: Jann_1539
Alternate gene names: NA
Gene position: 1509358-1511145 (Clockwise)
Preceding gene: 89054029
Following gene: 89054031
Centisome position: 34.96
GC content: 53.69
Gene sequence:
>1788_bases ATGCGCAGTACCAAAGCTCTGTCCGTAGTCTTCGTTTGTTTGGCCAGCGTGGCTGCGGCGGACAGTCCGTTTGTAGTTGG TACTGCAACCGGGGAAGTGTTCTATCGTCCAGTCGATACAGATCCAATTTTCTCGGGCGAACAAATTGAGATCTCAGGCG CTGAAAACACGATTGGCTCGTATGTTCTCTCGGGCGGGGAAGTGAACACGTTGACTTTCGGTTCAAGTGGACCGGGCATC GAAAACTCTCCCGATGTTGGTGTCGCGCGACGACCGGGGTCAATTGGTACCTTTACTGTTACCGGAGAAGGAACTGAGTT TAATATGCTCGGCGCTGACGAAGGTATGGTCATTCAAATCGGACGGCGTGGCGGTGTCGGTACTTTCAACGTCTTGGATG GAGCCTTTCTATCCCTCAATAGCCCAACCAACGTTGCTCCAATCAACGCTGTCTCGATCCAACTCGGTCAAGAAGGCGGT ACTGGAACGCTCAACGTTGATGATGGCACCGTGAACATTCAATCAACACGAGACGCGTTTCTTTTCCTTGGTGGGAACAT CATCGGCTCCGAACTTCCAGGCGGAGATGCCACGGCGAATTTCTTGAATGGAAGCAGCCTAAACATCATTGCGAATGCGC CCATCATCCCATTGGTCGATGATATCTCCGAGGCTTCAATAGTATTAGGGCAGACTGCGGGCGCATCGGCGGAAATGATC GTCGACGCGTCGGACATATTGGTCCGAGGTGAAGCCGGATACGCAGGGCTGTCGGTTGGTCGTGAAGAAGACTCGTCGGG AACTTTCGAGCTTCGCAACGGTGCAAGCGTGCTGTTGGAGGCAAACACACTGGGTGTCTCGGCGCCAGGAAGCTACACAG GAGCGTTTTTTGACATTGGCCGAGATGATGGTGCCAATGGACAAGCAACCATTTCGAGTAGCTCCACTCTGACGATGACG AGTGAGGTGGACGGAGCGTTCATCGGCGTGGGACGGGGAGAGGGCGGCTTTGGGCGCCTGACAGTTGAAGATGGCGGTTC GATCACATATGCTTCGCCAAGTAACGACGGCTTCATGGAGATTGGCCAGAACGACCCTAACGCTGCGAACGGTGGTGTCG GGATCATGACCGTCACCGGCGCGGGGTCAGTAGTGGACTTTGACGGCGAGATCAGCGTCGGAAACGAAATCGGCACCGGG TCGTCGACAGGGCTGCTTACGGTTGCGAACGGCGGCCAACTGTCGGCGGGTACAATCAATCTGTGGGATGGTGGCTTTCT ACTCGGGAATGGCGGCACGATTTCCGGAAATGTGTTCGCACACGCCGGGTCATTTATCGCACCCGGCGCATCGCCTGGCG TGATGACCATTGATGGAAACCTGTCAATGCTGACGGGGAGTACCTTGGAGTTAGAATTCGCCGGTCCGCAAGTGGGACAA TTCGACGTTCTCAGTGTCCTAGGCGACTTGACCGCAGACGGGCCTTTCAATCTCGTATTTTCTTTCCTTGATGGATACCA ACCGGGCGAGATTGAAGCCTTCGATATCTTAAATGTTGCGGGTAGTTTTCAGTCGAATTTCTTCGATTTGGCACGAATAG ACTTCTTAGGTCTGAACAATGCTTCAGTCGACTTGAGCTTTGGGCCAAATGGTACTCTGTCAGCTCGTTTTTCCGATGTC GCACCAATTCCACTACCAGCATCGTTTTGGATGCTGGTAGTGAGTCTTGGCACTCTTCGCATTGTACAGAGAAGACGATT TCTGTCTACTGCGCAGCCGAAGGCATGA
Upstream 100 bases:
>100_bases TACGCTGACCTCCCCCGACTGGGGGATGACATGTTAAGGTTTCGCAGGAAAATTTCTTCCATCTTTTTTGGGGGAAGTTT TTTAAATGTTGGAGAATAAT
Downstream 100 bases:
>100_bases AAGGGAGAGTATTTGAATGTGTTATGCTAAAACTATGGGTATGGTTGCCCTCATGATTTTAGGATCAGATCAAGCTGGCG CACAAGCAACATTCCCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MRSTKALSVVFVCLASVAAADSPFVVGTATGEVFYRPVDTDPIFSGEQIEISGAENTIGSYVLSGGEVNTLTFGSSGPGI ENSPDVGVARRPGSIGTFTVTGEGTEFNMLGADEGMVIQIGRRGGVGTFNVLDGAFLSLNSPTNVAPINAVSIQLGQEGG TGTLNVDDGTVNIQSTRDAFLFLGGNIIGSELPGGDATANFLNGSSLNIIANAPIIPLVDDISEASIVLGQTAGASAEMI VDASDILVRGEAGYAGLSVGREEDSSGTFELRNGASVLLEANTLGVSAPGSYTGAFFDIGRDDGANGQATISSSSTLTMT SEVDGAFIGVGRGEGGFGRLTVEDGGSITYASPSNDGFMEIGQNDPNAANGGVGIMTVTGAGSVVDFDGEISVGNEIGTG SSTGLLTVANGGQLSAGTINLWDGGFLLGNGGTISGNVFAHAGSFIAPGASPGVMTIDGNLSMLTGSTLELEFAGPQVGQ FDVLSVLGDLTADGPFNLVFSFLDGYQPGEIEAFDILNVAGSFQSNFFDLARIDFLGLNNASVDLSFGPNGTLSARFSDV APIPLPASFWMLVVSLGTLRIVQRRRFLSTAQPKA
Sequences:
>Translated_595_residues MRSTKALSVVFVCLASVAAADSPFVVGTATGEVFYRPVDTDPIFSGEQIEISGAENTIGSYVLSGGEVNTLTFGSSGPGI ENSPDVGVARRPGSIGTFTVTGEGTEFNMLGADEGMVIQIGRRGGVGTFNVLDGAFLSLNSPTNVAPINAVSIQLGQEGG TGTLNVDDGTVNIQSTRDAFLFLGGNIIGSELPGGDATANFLNGSSLNIIANAPIIPLVDDISEASIVLGQTAGASAEMI VDASDILVRGEAGYAGLSVGREEDSSGTFELRNGASVLLEANTLGVSAPGSYTGAFFDIGRDDGANGQATISSSSTLTMT SEVDGAFIGVGRGEGGFGRLTVEDGGSITYASPSNDGFMEIGQNDPNAANGGVGIMTVTGAGSVVDFDGEISVGNEIGTG SSTGLLTVANGGQLSAGTINLWDGGFLLGNGGTISGNVFAHAGSFIAPGASPGVMTIDGNLSMLTGSTLELEFAGPQVGQ FDVLSVLGDLTADGPFNLVFSFLDGYQPGEIEAFDILNVAGSFQSNFFDLARIDFLGLNNASVDLSFGPNGTLSARFSDV APIPLPASFWMLVVSLGTLRIVQRRRFLSTAQPKA >Mature_595_residues MRSTKALSVVFVCLASVAAADSPFVVGTATGEVFYRPVDTDPIFSGEQIEISGAENTIGSYVLSGGEVNTLTFGSSGPGI ENSPDVGVARRPGSIGTFTVTGEGTEFNMLGADEGMVIQIGRRGGVGTFNVLDGAFLSLNSPTNVAPINAVSIQLGQEGG TGTLNVDDGTVNIQSTRDAFLFLGGNIIGSELPGGDATANFLNGSSLNIIANAPIIPLVDDISEASIVLGQTAGASAEMI VDASDILVRGEAGYAGLSVGREEDSSGTFELRNGASVLLEANTLGVSAPGSYTGAFFDIGRDDGANGQATISSSSTLTMT SEVDGAFIGVGRGEGGFGRLTVEDGGSITYASPSNDGFMEIGQNDPNAANGGVGIMTVTGAGSVVDFDGEISVGNEIGTG SSTGLLTVANGGQLSAGTINLWDGGFLLGNGGTISGNVFAHAGSFIAPGASPGVMTIDGNLSMLTGSTLELEFAGPQVGQ FDVLSVLGDLTADGPFNLVFSFLDGYQPGEIEAFDILNVAGSFQSNFFDLARIDFLGLNNASVDLSFGPNGTLSARFSDV APIPLPASFWMLVVSLGTLRIVQRRRFLSTAQPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60349; Mature: 60349
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTKALSVVFVCLASVAAADSPFVVGTATGEVFYRPVDTDPIFSGEQIEISGAENTIGS CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCC YVLSGGEVNTLTFGSSGPGIENSPDVGVARRPGSIGTFTVTGEGTEFNMLGADEGMVIQI EEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEE GRRGGVGTFNVLDGAFLSLNSPTNVAPINAVSIQLGQEGGTGTLNVDDGTVNIQSTRDAF ECCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEEECCCCEE LFLGGNIIGSELPGGDATANFLNGSSLNIIANAPIIPLVDDISEASIVLGQTAGASAEMI EEECCEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCEEEE VDASDILVRGEAGYAGLSVGREEDSSGTFELRNGASVLLEANTLGVSAPGSYTGAFFDIG EECCCEEEECCCCCCEEECCCCCCCCCCEEEECCCEEEEEECEEEEECCCCCCEEEEECC RDDGANGQATISSSSTLTMTSEVDGAFIGVGRGEGGFGRLTVEDGGSITYASPSNDGFME CCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEEECCCEEEEECCCCCCEEE IGQNDPNAANGGVGIMTVTGAGSVVDFDGEISVGNEIGTGSSTGLLTVANGGQLSAGTIN ECCCCCCCCCCCEEEEEEECCCCEEEECCCEEECCCCCCCCCCCEEEEECCCEEECCEEE LWDGGFLLGNGGTISGNVFAHAGSFIAPGASPGVMTIDGNLSMLTGSTLELEFAGPQVGQ EECCCEEEECCCEEECCEEEECCCEECCCCCCCEEEECCCEEEEECCEEEEEECCCCCCC FDVLSVLGDLTADGPFNLVFSFLDGYQPGEIEAFDILNVAGSFQSNFFDLARIDFLGLNN HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCCCEEEEEEEEEECCC ASVDLSFGPNGTLSARFSDVAPIPLPASFWMLVVSLGTLRIVQRRRFLSTAQPKA CEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRSTKALSVVFVCLASVAAADSPFVVGTATGEVFYRPVDTDPIFSGEQIEISGAENTIGS CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCC YVLSGGEVNTLTFGSSGPGIENSPDVGVARRPGSIGTFTVTGEGTEFNMLGADEGMVIQI EEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEE GRRGGVGTFNVLDGAFLSLNSPTNVAPINAVSIQLGQEGGTGTLNVDDGTVNIQSTRDAF ECCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEEECCCCEE LFLGGNIIGSELPGGDATANFLNGSSLNIIANAPIIPLVDDISEASIVLGQTAGASAEMI EEECCEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCEEEE VDASDILVRGEAGYAGLSVGREEDSSGTFELRNGASVLLEANTLGVSAPGSYTGAFFDIG EECCCEEEECCCCCCEEECCCCCCCCCCEEEECCCEEEEEECEEEEECCCCCCEEEEECC RDDGANGQATISSSSTLTMTSEVDGAFIGVGRGEGGFGRLTVEDGGSITYASPSNDGFME CCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEEECCCEEEEECCCCCCEEE IGQNDPNAANGGVGIMTVTGAGSVVDFDGEISVGNEIGTGSSTGLLTVANGGQLSAGTIN ECCCCCCCCCCCEEEEEEECCCCEEEECCCEEECCCCCCCCCCCEEEEECCCEEECCEEE LWDGGFLLGNGGTISGNVFAHAGSFIAPGASPGVMTIDGNLSMLTGSTLELEFAGPQVGQ EECCCEEEECCCEEECCEEEECCCEECCCCCCCEEEECCCEEEEECCEEEEEECCCCCCC FDVLSVLGDLTADGPFNLVFSFLDGYQPGEIEAFDILNVAGSFQSNFFDLARIDFLGLNN HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCCCEEEEEEEEEECCC ASVDLSFGPNGTLSARFSDVAPIPLPASFWMLVVSLGTLRIVQRRRFLSTAQPKA CEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA