| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is glnA [H]
Identifier: 89054006
GI number: 89054006
Start: 1484641
End: 1486047
Strand: Reverse
Name: glnA [H]
Synonym: Jann_1515
Alternate gene names: 89054006
Gene position: 1486047-1484641 (Counterclockwise)
Preceding gene: 89054007
Following gene: 89054005
Centisome position: 34.42
GC content: 59.63
Gene sequence:
>1407_bases ATGAGCACAGAGAGCTTTTTGAAAATGATGAAGGACGAGGACGTCGAGTACGTCGATGTTCGCTTCACCGACCCACGCGG CAAGTTGCAGCACGTCACGCTGATGGCCGACCAGGTTGACGAGGATTTCATCGAAGAGGGCTTCATGTTCGACGGCTCCT CCATCGCCGGTTGGAAGGGCATTGAAGCCTCCGACATGAAGCTGATGCTGGACACGAACTCGGGCTATGTGGACCCCTTC TACGCCGAAAAAACGCTCTGCGTGCATTGCTCGGTCGTGGAGCCCGACACGGGCGAGGCCTATGAGCGCGACCCGCGCGG CACGGCGGAAAAGGCCGAAGCCTACCTGATTTCCAGCGGCATCGGCGACAATTTCTACTGCGGCCCCGAAGCGGAATTCT TCATCTTTGACGATGTGCGGATGTCCGTTGAGATCAACAAGGTCTCCTATGAGGTCGACGCGCAGGACGCCTCCTGGAAC GGCGATACCGAATATGAGATGGGCAATATGGGCCACCGCCCGGGCGTCAAAGGCGGCTACTTCCCCGTCAACCCGATCGA CGCCTCCCACGATCTGCGCTCGGAAATGCTGTCCACGATGAAGCGCATCGGCATGAAGGTCGACAAGCACCACCACGAGG TGGCGTCGTGCCAGCACGAGCTGGGTCTGATCTTTGACAGCCTCACCAAACAGGCCGATGAGTTGCAGAAATACAAATAC GTGATCCACAACGTGGCCCACGCCTATGGCAAATCCGCCACCTTCATGCCCAAGCCCATCGCGGGCGACAATGGCACCGG AATGCACGTGAACATGTCGATCTGGAAGGACGGCAAGCCCTTGTTTGCAGGCGACAAATACGCCGATCTGTCGGACGAGG CGCTGTATTTCATTGGGGGTATCCTGAAGCACGCCAAGGCGCTGAACGCGTTCACGAACCCCTCCACCAACTCCTACAAG CGTCTGATCCCGGGCTTTGAGGCCCCGGTTCTGCGCGCGTATTCTGCTCGCAACCGGTCGGGCTGTGTGCGGATCCCGTG GACGGAAAGCCCCAAGGCCAAGCGTGTGGAAGCGCGCTTCCCTGACCCGGCGGCGAACCCCTATCTGTGCTTCGCGGCGC TGTTGATGGCGGGCCTTGACGGTATCCAGAACAAGATCCACCCCGGCGATCCGTCGGACAAGGATCTGTACGATCTGCCG CCGGAAGAACTGGCCGGTATCCCCACGGTCTGCGCCTCCCTGCGCGAAGCGCTGGACGAGCTGGAAGCCGATCACGAGTT CCTGCTGAAGGGCGACGTGTTCACCCGCAGTCAGATCGAAGGCTACTGCGCGCTGAAGTGGGAAGAGGTCTATGCCTACG AGCACACGCCGCACCCGATGGAATACAAGATGTATTACAGCTGCTAA
Upstream 100 bases:
>100_bases GATCCGCATCCGAACCGGCGAAGCGGGCGAAGACGCGCTGTAAGCCCTGCTCAAGGTTGAGCAATACCCTAACCCCTTAC GATTTCAAGGAAAAGTGACG
Downstream 100 bases:
>100_bases CCTCCGGTTAGACATGTACTACAGCTGCTAACCTCCGGTTAGACCTGTAGAACAACCGCTGATTGGCCGCGTGTCACGGC ACACGATAAAAGGGGCGCCC
Product: L-glutamine synthetase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSTESFLKMMKDEDVEYVDVRFTDPRGKLQHVTLMADQVDEDFIEEGFMFDGSSIAGWKGIEASDMKLMLDTNSGYVDPF YAEKTLCVHCSVVEPDTGEAYERDPRGTAEKAEAYLISSGIGDNFYCGPEAEFFIFDDVRMSVEINKVSYEVDAQDASWN GDTEYEMGNMGHRPGVKGGYFPVNPIDASHDLRSEMLSTMKRIGMKVDKHHHEVASCQHELGLIFDSLTKQADELQKYKY VIHNVAHAYGKSATFMPKPIAGDNGTGMHVNMSIWKDGKPLFAGDKYADLSDEALYFIGGILKHAKALNAFTNPSTNSYK RLIPGFEAPVLRAYSARNRSGCVRIPWTESPKAKRVEARFPDPAANPYLCFAALLMAGLDGIQNKIHPGDPSDKDLYDLP PEELAGIPTVCASLREALDELEADHEFLLKGDVFTRSQIEGYCALKWEEVYAYEHTPHPMEYKMYYSC
Sequences:
>Translated_468_residues MSTESFLKMMKDEDVEYVDVRFTDPRGKLQHVTLMADQVDEDFIEEGFMFDGSSIAGWKGIEASDMKLMLDTNSGYVDPF YAEKTLCVHCSVVEPDTGEAYERDPRGTAEKAEAYLISSGIGDNFYCGPEAEFFIFDDVRMSVEINKVSYEVDAQDASWN GDTEYEMGNMGHRPGVKGGYFPVNPIDASHDLRSEMLSTMKRIGMKVDKHHHEVASCQHELGLIFDSLTKQADELQKYKY VIHNVAHAYGKSATFMPKPIAGDNGTGMHVNMSIWKDGKPLFAGDKYADLSDEALYFIGGILKHAKALNAFTNPSTNSYK RLIPGFEAPVLRAYSARNRSGCVRIPWTESPKAKRVEARFPDPAANPYLCFAALLMAGLDGIQNKIHPGDPSDKDLYDLP PEELAGIPTVCASLREALDELEADHEFLLKGDVFTRSQIEGYCALKWEEVYAYEHTPHPMEYKMYYSC >Mature_467_residues STESFLKMMKDEDVEYVDVRFTDPRGKLQHVTLMADQVDEDFIEEGFMFDGSSIAGWKGIEASDMKLMLDTNSGYVDPFY AEKTLCVHCSVVEPDTGEAYERDPRGTAEKAEAYLISSGIGDNFYCGPEAEFFIFDDVRMSVEINKVSYEVDAQDASWNG DTEYEMGNMGHRPGVKGGYFPVNPIDASHDLRSEMLSTMKRIGMKVDKHHHEVASCQHELGLIFDSLTKQADELQKYKYV IHNVAHAYGKSATFMPKPIAGDNGTGMHVNMSIWKDGKPLFAGDKYADLSDEALYFIGGILKHAKALNAFTNPSTNSYKR LIPGFEAPVLRAYSARNRSGCVRIPWTESPKAKRVEARFPDPAANPYLCFAALLMAGLDGIQNKIHPGDPSDKDLYDLPP EELAGIPTVCASLREALDELEADHEFLLKGDVFTRSQIEGYCALKWEEVYAYEHTPHPMEYKMYYSC
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=469, Percent_Identity=59.4882729211087, Blast_Score=604, Evalue=1e-174, Organism=Escherichia coli, GI87081870, Length=175, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 52487; Mature: 52355
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTESFLKMMKDEDVEYVDVRFTDPRGKLQHVTLMADQVDEDFIEEGFMFDGSSIAGWKG CCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCEECCCCCCCCCC IEASDMKLMLDTNSGYVDPFYAEKTLCVHCSVVEPDTGEAYERDPRGTAEKAEAYLISSG CCCCCCEEEEECCCCCCCCHHCCCEEEEEEEEECCCCCCHHCCCCCCCHHHHHEEEEECC IGDNFYCGPEAEFFIFDDVRMSVEINKVSYEVDAQDASWNGDTEYEMGNMGHRPGVKGGY CCCCCEECCCCCEEEEECEEEEEEEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCC FPVNPIDASHDLRSEMLSTMKRIGMKVDKHHHEVASCQHELGLIFDSLTKQADELQKYKY CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIHNVAHAYGKSATFMPKPIAGDNGTGMHVNMSIWKDGKPLFAGDKYADLSDEALYFIGG HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH ILKHAKALNAFTNPSTNSYKRLIPGFEAPVLRAYSARNRSGCVRIPWTESPKAKRVEARF HHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCEEECCC PDPAANPYLCFAALLMAGLDGIQNKIHPGDPSDKDLYDLPPEELAGIPTVCASLREALDE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH LEADHEFLLKGDVFTRSQIEGYCALKWEEVYAYEHTPHPMEYKMYYSC HCCCCEEEEECCCEEHHHCCCEEEEEEEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure STESFLKMMKDEDVEYVDVRFTDPRGKLQHVTLMADQVDEDFIEEGFMFDGSSIAGWKG CHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCEECCCCCCCCCC IEASDMKLMLDTNSGYVDPFYAEKTLCVHCSVVEPDTGEAYERDPRGTAEKAEAYLISSG CCCCCCEEEEECCCCCCCCHHCCCEEEEEEEEECCCCCCHHCCCCCCCHHHHHEEEEECC IGDNFYCGPEAEFFIFDDVRMSVEINKVSYEVDAQDASWNGDTEYEMGNMGHRPGVKGGY CCCCCEECCCCCEEEEECEEEEEEEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCC FPVNPIDASHDLRSEMLSTMKRIGMKVDKHHHEVASCQHELGLIFDSLTKQADELQKYKY CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIHNVAHAYGKSATFMPKPIAGDNGTGMHVNMSIWKDGKPLFAGDKYADLSDEALYFIGG HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH ILKHAKALNAFTNPSTNSYKRLIPGFEAPVLRAYSARNRSGCVRIPWTESPKAKRVEARF HHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCEEECCC PDPAANPYLCFAALLMAGLDGIQNKIHPGDPSDKDLYDLPPEELAGIPTVCASLREALDE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH LEADHEFLLKGDVFTRSQIEGYCALKWEEVYAYEHTPHPMEYKMYYSC HCCCCEEEEECCCEEHHHCCCEEEEEEEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7921264 [H]