| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053991
Identifier: 89053991
GI number: 89053991
Start: 1470868
End: 1471278
Strand: Direct
Name: 89053991
Synonym: Jann_1500
Alternate gene names: NA
Gene position: 1470868-1471278 (Clockwise)
Preceding gene: 89053990
Following gene: 89053992
Centisome position: 34.06
GC content: 60.34
Gene sequence:
>411_bases ATGAAGCTGAACGGTCAATGTCATTGTGGCGCGGTGCGCTTTACGGCTGAATTGAAGGGCGGGTTGGCGTCCGCGCGGCG CTGCGATTGCTCGCTGTGCACGATGCGCGGGGCGGTGGCCGTCTCTGCCGCGCTGGACGGGCTCCAGATCACCCAAGGCG CTGATAACCTGACGCTTTACCAGTTCAACACCCGCGTGGCGGAGCATTACTTTTGCAAGAGTTGCGGCATCTATACGCAT CACAAGCGGCGATCAAACCCCAATGAATACGGCGTGAACCTCGCCTGTCTGGACGGGCAATCGCCGTTCCAACTGGCCGA AATCATTGTCCACGATGGCCAGCAACACCCCAATGACGGTGGCCCTGCCGATGGGGTCGCGGGCATCCTTCGATACGAGG CCAAGACATGA
Upstream 100 bases:
>100_bases TGCGCGCGCTCAATCAGGTGAATACGGGCCTCGGATTTGAGAGCGGATTTATCATCGTCGTCGTGGCCATCGTGCTGGAC CGAACCTTGAGGGTGAAAAC
Downstream 100 bases:
>100_bases GCACCGCCGTGTCCTTCCGCGATGTCTGCATCATGTTCGGCCCCCGCCCGGCCCGCGCCCTGAGCCTTGCGGATGAAGGC GGCACAAGGTCCGAGATTCA
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Plasmid PRiA4b ORF-3 Family Protein; Inner Membrane Protein; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKLNGQCHCGAVRFTAELKGGLASARRCDCSLCTMRGAVAVSAALDGLQITQGADNLTLYQFNTRVAEHYFCKSCGIYTH HKRRSNPNEYGVNLACLDGQSPFQLAEIIVHDGQQHPNDGGPADGVAGILRYEAKT
Sequences:
>Translated_136_residues MKLNGQCHCGAVRFTAELKGGLASARRCDCSLCTMRGAVAVSAALDGLQITQGADNLTLYQFNTRVAEHYFCKSCGIYTH HKRRSNPNEYGVNLACLDGQSPFQLAEIIVHDGQQHPNDGGPADGVAGILRYEAKT >Mature_136_residues MKLNGQCHCGAVRFTAELKGGLASARRCDCSLCTMRGAVAVSAALDGLQITQGADNLTLYQFNTRVAEHYFCKSCGIYTH HKRRSNPNEYGVNLACLDGQSPFQLAEIIVHDGQQHPNDGGPADGVAGILRYEAKT
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=98, Percent_Identity=37.7551020408163, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25149380, Length=100, Percent_Identity=36, Blast_Score=75, Evalue=7e-15, Organism=Caenorhabditis elegans, GI25149382, Length=90, Percent_Identity=37.7777777777778, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14657; Mature: 14657
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNGQCHCGAVRFTAELKGGLASARRCDCSLCTMRGAVAVSAALDGLQITQGADNLTLY CCCCCCEECCEEEEEEECCCCCCCCCCCCCHHHHHCCHHHEEHHCCCEEEECCCCCEEEE QFNTRVAEHYFCKSCGIYTHHKRRSNPNEYGVNLACLDGQSPFQLAEIIVHDGQQHPNDG EECCHHHHHHHHHHCCCCCCCCCCCCCCHHCCEEEEECCCCHHHHHHHHHHCCCCCCCCC GPADGVAGILRYEAKT CCCCHHHHHHEEECCC >Mature Secondary Structure MKLNGQCHCGAVRFTAELKGGLASARRCDCSLCTMRGAVAVSAALDGLQITQGADNLTLY CCCCCCEECCEEEEEEECCCCCCCCCCCCCHHHHHCCHHHEEHHCCCEEEECCCCCEEEE QFNTRVAEHYFCKSCGIYTHHKRRSNPNEYGVNLACLDGQSPFQLAEIIVHDGQQHPNDG EECCHHHHHHHHHHCCCCCCCCCCCCCCHHCCEEEEECCCCHHHHHHHHHHCCCCCCCCC GPADGVAGILRYEAKT CCCCHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA