Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053980

Identifier: 89053980

GI number: 89053980

Start: 1459263

End: 1459949

Strand: Direct

Name: 89053980

Synonym: Jann_1489

Alternate gene names: NA

Gene position: 1459263-1459949 (Clockwise)

Preceding gene: 89053969

Following gene: 89053981

Centisome position: 33.8

GC content: 57.5

Gene sequence:

>687_bases
ATGATCCTGCTTAGTCCAGAGACAGTTTTGAACCCGTCGGCACTTGAGACGCGGTCGCTTCCGAAAAAGATCATCGGGCG
CGTGCAAATCCTGCCCAGATCGGCAGGGCCATCGACGTGGATACGACTGATCGTTGAGATGCAGATCATACGGTACTTAT
TCGCCCTACTGCCGTTTCTCGTTTTGATATTATTTTCCAGAGACTTAGCGCTCCCGGTCACCCAAGCGCCGCTCGCGATG
ATCCTTGTAATCGGAATAGTTGAGCTGAAGATTCTGCGCTTGTCTGGCCCCGCACGAGAGCGGTTGATGTCCCAAAACGC
CGCTGACCGCATTCATGATGCATTCACCTTCCGTGCTAAGGCGGTGCTGCGCCGAATTGCGGCGCGTCGGGGCGTGACAG
ACGGCGAATTGCGTCTGGTGGCGGAGCAATCTGAACTCGCGCGCGTCCCTCCGTTGACATTCCTCTCGATCCAATCCGCA
GAGCCTACGCCACATATTGTAGCATTAGCTCCTCAGGACCGCGATATCTTGCGAGAATTGTTCGACGACACCTTGAGTGA
ACGTGACTTGCATCGCGCCAATCTGCGCACGGACACCGCGGTGCGTGAGGTTCAGATTGAGGCTGCGGGCGTCTCAGCGC
ACGGACGCCTGGCGGCCTGGATCGACGCGCAACCGGTGGAGGCATAG

Upstream 100 bases:

>100_bases
CGTAATGCCGCCGCATCATGAGGCCTGGTAAACCCGGTACTATTGGGCACCACTGAAAGCTGCGCTAGTATTGTGATGTC
CCGTTTAGAAGTCATCGCGC

Downstream 100 bases:

>100_bases
GTCATGGCGATCAATGCAAGCAACGTATCTGCCGGGGCTGCGCTGGAGGTTCTGCACGCTGGTTGGGCCGCGCAACAGGC
GGGTGAATTAACCACGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MILLSPETVLNPSALETRSLPKKIIGRVQILPRSAGPSTWIRLIVEMQIIRYLFALLPFLVLILFSRDLALPVTQAPLAM
ILVIGIVELKILRLSGPARERLMSQNAADRIHDAFTFRAKAVLRRIAARRGVTDGELRLVAEQSELARVPPLTFLSIQSA
EPTPHIVALAPQDRDILRELFDDTLSERDLHRANLRTDTAVREVQIEAAGVSAHGRLAAWIDAQPVEA

Sequences:

>Translated_228_residues
MILLSPETVLNPSALETRSLPKKIIGRVQILPRSAGPSTWIRLIVEMQIIRYLFALLPFLVLILFSRDLALPVTQAPLAM
ILVIGIVELKILRLSGPARERLMSQNAADRIHDAFTFRAKAVLRRIAARRGVTDGELRLVAEQSELARVPPLTFLSIQSA
EPTPHIVALAPQDRDILRELFDDTLSERDLHRANLRTDTAVREVQIEAAGVSAHGRLAAWIDAQPVEA
>Mature_228_residues
MILLSPETVLNPSALETRSLPKKIIGRVQILPRSAGPSTWIRLIVEMQIIRYLFALLPFLVLILFSRDLALPVTQAPLAM
ILVIGIVELKILRLSGPARERLMSQNAADRIHDAFTFRAKAVLRRIAARRGVTDGELRLVAEQSELARVPPLTFLSIQSA
EPTPHIVALAPQDRDILRELFDDTLSERDLHRANLRTDTAVREVQIEAAGVSAHGRLAAWIDAQPVEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25332; Mature: 25332

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLSPETVLNPSALETRSLPKKIIGRVQILPRSAGPSTWIRLIVEMQIIRYLFALLPFL
CEEECCCHHCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLILFSRDLALPVTQAPLAMILVIGIVELKILRLSGPARERLMSQNAADRIHDAFTFRAK
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCHHHHHHHHHHHHHHH
AVLRRIAARRGVTDGELRLVAEQSELARVPPLTFLSIQSAEPTPHIVALAPQDRDILREL
HHHHHHHHHCCCCCCCEEEEECHHHHHCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHH
FDDTLSERDLHRANLRTDTAVREVQIEAAGVSAHGRLAAWIDAQPVEA
HHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MILLSPETVLNPSALETRSLPKKIIGRVQILPRSAGPSTWIRLIVEMQIIRYLFALLPFL
CEEECCCHHCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLILFSRDLALPVTQAPLAMILVIGIVELKILRLSGPARERLMSQNAADRIHDAFTFRAK
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCHHHHHHHHHHHHHHH
AVLRRIAARRGVTDGELRLVAEQSELARVPPLTFLSIQSAEPTPHIVALAPQDRDILREL
HHHHHHHHHCCCCCCCEEEEECHHHHHCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHH
FDDTLSERDLHRANLRTDTAVREVQIEAAGVSAHGRLAAWIDAQPVEA
HHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA