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The map label for this gene is dadA [H]

Identifier: 89053901

GI number: 89053901

Start: 1379384

End: 1380631

Strand: Direct

Name: dadA [H]

Synonym: Jann_1410

Alternate gene names: 89053901

Gene position: 1379384-1380631 (Clockwise)

Preceding gene: 89053899

Following gene: 89053902

Centisome position: 31.95

GC content: 64.42

Gene sequence:

>1248_bases
ATGACTGCCGAGCATCCGACCGTCGTGATCGGGGCCGGGATTGTCGGCGTCTCCACCGCGATATGGCTGCGCCGCGCGGG
GCGAGAGGTCACGCTGGTGGATCGCAATGCGCCGGGGCAGGGGACGTCATACGGCAACGCGGGCGTCATCGCGAATTGCT
CCGTCGTGCCGGTGACAACGCCGGGACTGATCCGCAAGGGGCCGAAGTTGGCGCTGGACCCGAATTTCCCGCTGTTCCTG
CGCTGGTCCTACTTTCCTAAGCTGTTGCCTTGGCTGGTGAAATACCTCGGGAACGCCAATGACACAGACACGCGGCGCAT
CGCCAGGGGGCTGACAGACATCGTCGGCGACGGGGTGGAGCAGCACAGCGCTTTGTCGGGCGGAACACGGGCTGCGGAGT
GGATGCAGACCAGCGATTACACCTTCGGCTATGCGGATCGGGCGGCCTTTGAGGGCGATGCCTACGTCTGGGGCCTGCGG
CGCGACGCGGGCTTTGTGCCGGAGCTGATCGAAGGCGATGCGACCATCGATTATGAGCCCAACCTGGGCAGTGACATCCG
TTGCCTCGCGGTGATGAAGGACCACGGGTTCATCCGGGACCCGGGCGGCTATGTGGCGGCCTTGGCGGAGGAATTCCAGG
CCCTTGGCGGGGTCTGGCGGCAGGCTGACGTGAAGGATTTCACCTCCTCCGGCGATAAGGTCACTGCCATTGAGACGACG
ACAGGGCCCGTCCCCTGCGATGATGTCGTGCTGGCAACGGGCGTCTGGTCCAAGCCATTGATGAAGCGCCTTGGCCTGAC
AATTCCGCTGGAGACGGAGCGGGGCTATCACATCGTCTACAAGAATGCCGAGAACGCCCCCAAAATGCCGATCATGGTCG
CGTCGGGCAAGTTCGTCGCGACCCCAATGGCGGAGGGTCTGCGCTGTGCGGGTGTGGTCGAATTTGGCGGGCTGGAGGCC
GGGCCATCAAAGGCGCCGCTGGCGTTGCTGCGCAAACAAGTCAAACAGGCCTTCCCGCACCTGAAGGCTGAGGATGAGAT
CGAATGGCAGGGCCACCGCCCTGCACCCTCCGACAGTCTTCCGCTGATCGGGCAGGTGCGGAACACCGGGGTCTATGTGG
GCTTCGGCCACCACCACATTGGCCTGACGGGCGGGCCCAAAACGGGCCGCCTGATCGCGCAGCTGATGACGGGGCAGCGT
CCTAACATGGACATGTCCCCGTATGATCCGGCAAGGTTCGCGTCGTGA

Upstream 100 bases:

>100_bases
TCAACAAATTGTTGACGTATTGTTTTTCACGGTCAAGGGTAAGGCGCGAAACAGGAGCTTGTTTGATGGCAACGCGGATC
ACATCACGGGGGAAGGCGGC

Downstream 100 bases:

>100_bases
GCCAAGCCGGATGAACCCAAAAGAAACGGACATTCAACAAGGAGAAGACACATGAAATTCACTCACATCGCGGTCTGCAT
GGCCGCCGCATCCGTGGCAT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTAEHPTVVIGAGIVGVSTAIWLRRAGREVTLVDRNAPGQGTSYGNAGVIANCSVVPVTTPGLIRKGPKLALDPNFPLFL
RWSYFPKLLPWLVKYLGNANDTDTRRIARGLTDIVGDGVEQHSALSGGTRAAEWMQTSDYTFGYADRAAFEGDAYVWGLR
RDAGFVPELIEGDATIDYEPNLGSDIRCLAVMKDHGFIRDPGGYVAALAEEFQALGGVWRQADVKDFTSSGDKVTAIETT
TGPVPCDDVVLATGVWSKPLMKRLGLTIPLETERGYHIVYKNAENAPKMPIMVASGKFVATPMAEGLRCAGVVEFGGLEA
GPSKAPLALLRKQVKQAFPHLKAEDEIEWQGHRPAPSDSLPLIGQVRNTGVYVGFGHHHIGLTGGPKTGRLIAQLMTGQR
PNMDMSPYDPARFAS

Sequences:

>Translated_415_residues
MTAEHPTVVIGAGIVGVSTAIWLRRAGREVTLVDRNAPGQGTSYGNAGVIANCSVVPVTTPGLIRKGPKLALDPNFPLFL
RWSYFPKLLPWLVKYLGNANDTDTRRIARGLTDIVGDGVEQHSALSGGTRAAEWMQTSDYTFGYADRAAFEGDAYVWGLR
RDAGFVPELIEGDATIDYEPNLGSDIRCLAVMKDHGFIRDPGGYVAALAEEFQALGGVWRQADVKDFTSSGDKVTAIETT
TGPVPCDDVVLATGVWSKPLMKRLGLTIPLETERGYHIVYKNAENAPKMPIMVASGKFVATPMAEGLRCAGVVEFGGLEA
GPSKAPLALLRKQVKQAFPHLKAEDEIEWQGHRPAPSDSLPLIGQVRNTGVYVGFGHHHIGLTGGPKTGRLIAQLMTGQR
PNMDMSPYDPARFAS
>Mature_414_residues
TAEHPTVVIGAGIVGVSTAIWLRRAGREVTLVDRNAPGQGTSYGNAGVIANCSVVPVTTPGLIRKGPKLALDPNFPLFLR
WSYFPKLLPWLVKYLGNANDTDTRRIARGLTDIVGDGVEQHSALSGGTRAAEWMQTSDYTFGYADRAAFEGDAYVWGLRR
DAGFVPELIEGDATIDYEPNLGSDIRCLAVMKDHGFIRDPGGYVAALAEEFQALGGVWRQADVKDFTSSGDKVTAIETTT
GPVPCDDVVLATGVWSKPLMKRLGLTIPLETERGYHIVYKNAENAPKMPIMVASGKFVATPMAEGLRCAGVVEFGGLEAG
PSKAPLALLRKQVKQAFPHLKAEDEIEWQGHRPAPSDSLPLIGQVRNTGVYVGFGHHHIGLTGGPKTGRLIAQLMTGQRP
NMDMSPYDPARFAS

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=432, Percent_Identity=25, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44711; Mature: 44579

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEHPTVVIGAGIVGVSTAIWLRRAGREVTLVDRNAPGQGTSYGNAGVIANCSVVPVTT
CCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECEEEEECC
PGLIRKGPKLALDPNFPLFLRWSYFPKLLPWLVKYLGNANDTDTRRIARGLTDIVGDGVE
CHHHCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
QHSALSGGTRAAEWMQTSDYTFGYADRAAFEGDAYVWGLRRDAGFVPELIEGDATIDYEP
HHHHHCCCCHHHHHHHCCCCEECCCCCCCCCCCEEEEEECCCCCCCHHHHCCCEEEEECC
NLGSDIRCLAVMKDHGFIRDPGGYVAALAEEFQALGGVWRQADVKDFTSSGDKVTAIETT
CCCCCEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECC
TGPVPCDDVVLATGVWSKPLMKRLGLTIPLETERGYHIVYKNAENAPKMPIMVASGKFVA
CCCCCCCCEEEECCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEE
TPMAEGLRCAGVVEFGGLEAGPSKAPLALLRKQVKQAFPHLKAEDEIEWQGHRPAPSDSL
CCHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PLIGQVRNTGVYVGFGHHHIGLTGGPKTGRLIAQLMTGQRPNMDMSPYDPARFAS
CCEEEECCCEEEEEECCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
TAEHPTVVIGAGIVGVSTAIWLRRAGREVTLVDRNAPGQGTSYGNAGVIANCSVVPVTT
CCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECEEEEECC
PGLIRKGPKLALDPNFPLFLRWSYFPKLLPWLVKYLGNANDTDTRRIARGLTDIVGDGVE
CHHHCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
QHSALSGGTRAAEWMQTSDYTFGYADRAAFEGDAYVWGLRRDAGFVPELIEGDATIDYEP
HHHHHCCCCHHHHHHHCCCCEECCCCCCCCCCCEEEEEECCCCCCCHHHHCCCEEEEECC
NLGSDIRCLAVMKDHGFIRDPGGYVAALAEEFQALGGVWRQADVKDFTSSGDKVTAIETT
CCCCCEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECC
TGPVPCDDVVLATGVWSKPLMKRLGLTIPLETERGYHIVYKNAENAPKMPIMVASGKFVA
CCCCCCCCEEEECCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEE
TPMAEGLRCAGVVEFGGLEAGPSKAPLALLRKQVKQAFPHLKAEDEIEWQGHRPAPSDSL
CCHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PLIGQVRNTGVYVGFGHHHIGLTGGPKTGRLIAQLMTGQRPNMDMSPYDPARFAS
CCEEEECCCEEEEEECCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA