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The map label for this gene is amiC [H]

Identifier: 89053795

GI number: 89053795

Start: 1263079

End: 1264392

Strand: Reverse

Name: amiC [H]

Synonym: Jann_1304

Alternate gene names: 89053795

Gene position: 1264392-1263079 (Counterclockwise)

Preceding gene: 89053796

Following gene: 89053794

Centisome position: 29.28

GC content: 65.22

Gene sequence:

>1314_bases
GTGGACGCCACGGCCCTCGCCAATGCCATCGCTCTGGGGCACACAACCGCCCCTGCCGTGATGAATGCCACTCTCGCTCG
CGCCCATGCGCAGGTGGGATTGGGGGCCGTGGCACGCCTTCTGCCACCGGATGTAATATCCGCGCCCGCATCGGGGCCGT
TGTCCGGCGTGCCGATGCTGGCCAAAGATCTGGGCTCGCATGCGAAAGGCCTCGCGCCCACCGCAGGATCGCAGGCCCTA
CGCACCCGGATCACCGACCCCACGACAGACAGCGATTTCTTCGCGATCATCTGCGCCCAGGGTCTTGTGCCCATCGGCCT
CAGTACCACCCCTGAATTCGGCTTCGCCCTCAGTTCCGAGCCGCCCGGCCAAGCTCCGGCTCTGAACCCGTTTGACACCT
CACTATCCCCCGGCGGCTCTTCTGGCGGCGCAGCGGCTGCCGTGGCCGCAGGCATCGTTGCCTTGGCACACGCGACCGAT
GCTGCGGGGTCCATCCGCGTACCGGCTGCGTGTTGCGGGTTATGGGGGCTCAAACCCTCACGCGCGGCAACTCCCATGGG
GCCGGATTTCGGCAATTATCTGATGGGCATCGTCGGCGAAGGCGTACTTGCCCGGTCCCTGCGCGACATTGTTACGGTTT
TTTCGCCGTTCTCTACCAAGGGCAGCGCGCCAAAGACGCCTCGTATCGCACTGGCCATCCCTGACCGCTGTGACCCGGTC
CAAGCCAAGGCGGCACGCCAGATCGCTGGCTTGCTTGAGGCCACAGGCGCAGAAATTATACCCACCCCCGCTCCCGATGA
TCTTGGGCGGGAAGCCCATAATATCGCGGGCCAGATCCTCGCCGTGTCTCTTGCCGAATGGCTGGACGCCTATGGGATCA
CAGATGCCGAAATCTCCCCGATCGCGGCTGCCAACGCCGCCCGTGGACGCGCCATGACGGGCTGTCAGGTCTTCGCGCTC
ACCCGCCGTATCCAGCAGATCAGCCACTCCGCCGCTGCCTTATTTGCTAAAACCGACGCGATCGTTATGCCGATTCTGTC
CGGTCCGCCGCCTCCAATCGGGGCCTTCCCCACCGATCTCACGGACGTCGCAGCGCACCTGGCAAGGATGGAGGCGATGG
CCCCAAACGCCGCGCTCGCCAACATCGCAGACCTGCCCGCCCTTGCCATACCGCTGCCGACCTCCCAACCGACACCAACC
GCCGTACAGCTCATCTGTCCTCATGGGTCCGACGCCACCCTGCTTGCGCTTGCAGCAACAATCGCCCCGCCTCCCATCAG
CTACCCCGCTCCAATAGCGGGGATGCCCCAGTGA

Upstream 100 bases:

>100_bases
AGTCCCAGCTGATGCCATCGCATCCATGGAAGCCCGTCAGGCGCAAATCCAGTCCGGCGAATGGGACGTGCCGATTGATA
ACGACGAGCCGGCCTAATAC

Downstream 100 bases:

>100_bases
GCGCCGTTCTGGAACTTGACGGAATTACCAAGCGGTTTGGTGCGTTGACGGCCAACGACAGTGTTTCGCTCACCCTTGGG
CAAGGCGAAGTGCTGGCCCT

Product: amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MDATALANAIALGHTTAPAVMNATLARAHAQVGLGAVARLLPPDVISAPASGPLSGVPMLAKDLGSHAKGLAPTAGSQAL
RTRITDPTTDSDFFAIICAQGLVPIGLSTTPEFGFALSSEPPGQAPALNPFDTSLSPGGSSGGAAAAVAAGIVALAHATD
AAGSIRVPAACCGLWGLKPSRAATPMGPDFGNYLMGIVGEGVLARSLRDIVTVFSPFSTKGSAPKTPRIALAIPDRCDPV
QAKAARQIAGLLEATGAEIIPTPAPDDLGREAHNIAGQILAVSLAEWLDAYGITDAEISPIAAANAARGRAMTGCQVFAL
TRRIQQISHSAAALFAKTDAIVMPILSGPPPPIGAFPTDLTDVAAHLARMEAMAPNAALANIADLPALAIPLPTSQPTPT
AVQLICPHGSDATLLALAATIAPPPISYPAPIAGMPQ

Sequences:

>Translated_437_residues
MDATALANAIALGHTTAPAVMNATLARAHAQVGLGAVARLLPPDVISAPASGPLSGVPMLAKDLGSHAKGLAPTAGSQAL
RTRITDPTTDSDFFAIICAQGLVPIGLSTTPEFGFALSSEPPGQAPALNPFDTSLSPGGSSGGAAAAVAAGIVALAHATD
AAGSIRVPAACCGLWGLKPSRAATPMGPDFGNYLMGIVGEGVLARSLRDIVTVFSPFSTKGSAPKTPRIALAIPDRCDPV
QAKAARQIAGLLEATGAEIIPTPAPDDLGREAHNIAGQILAVSLAEWLDAYGITDAEISPIAAANAARGRAMTGCQVFAL
TRRIQQISHSAAALFAKTDAIVMPILSGPPPPIGAFPTDLTDVAAHLARMEAMAPNAALANIADLPALAIPLPTSQPTPT
AVQLICPHGSDATLLALAATIAPPPISYPAPIAGMPQ
>Mature_437_residues
MDATALANAIALGHTTAPAVMNATLARAHAQVGLGAVARLLPPDVISAPASGPLSGVPMLAKDLGSHAKGLAPTAGSQAL
RTRITDPTTDSDFFAIICAQGLVPIGLSTTPEFGFALSSEPPGQAPALNPFDTSLSPGGSSGGAAAAVAAGIVALAHATD
AAGSIRVPAACCGLWGLKPSRAATPMGPDFGNYLMGIVGEGVLARSLRDIVTVFSPFSTKGSAPKTPRIALAIPDRCDPV
QAKAARQIAGLLEATGAEIIPTPAPDDLGREAHNIAGQILAVSLAEWLDAYGITDAEISPIAAANAARGRAMTGCQVFAL
TRRIQQISHSAAALFAKTDAIVMPILSGPPPPIGAFPTDLTDVAAHLARMEAMAPNAALANIADLPALAIPLPTSQPTPT
AVQLICPHGSDATLLALAATIAPPPISYPAPIAGMPQ

Specific function: Unknown

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17556264, Length=317, Percent_Identity=25.2365930599369, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71990152, Length=135, Percent_Identity=37.7777777777778, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644968, Length=147, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356731, Length=162, Percent_Identity=35.1851851851852, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: =3.5.1.4 [H]

Molecular weight: Translated: 43767; Mature: 43767

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00571 AMIDASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATALANAIALGHTTAPAVMNATLARAHAQVGLGAVARLLPPDVISAPASGPLSGVPML
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHH
AKDLGSHAKGLAPTAGSQALRTRITDPTTDSDFFAIICAQGLVPIGLSTTPEFGFALSSE
HHHHCHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHEECCCCEECCCCCCCCCCEEECCC
PPGQAPALNPFDTSLSPGGSSGGAAAAVAAGIVALAHATDAAGSIRVPAACCGLWGLKPS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCC
RAATPMGPDFGNYLMGIVGEGVLARSLRDIVTVFSPFSTKGSAPKTPRIALAIPDRCDPV
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCH
QAKAARQIAGLLEATGAEIIPTPAPDDLGREAHNIAGQILAVSLAEWLDAYGITDAEISP
HHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IAAANAARGRAMTGCQVFALTRRIQQISHSAAALFAKTDAIVMPILSGPPPPIGAFPTDL
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCH
TDVAAHLARMEAMAPNAALANIADLPALAIPLPTSQPTPTAVQLICPHGSDATLLALAAT
HHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHH
IAPPPISYPAPIAGMPQ
HCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDATALANAIALGHTTAPAVMNATLARAHAQVGLGAVARLLPPDVISAPASGPLSGVPML
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHH
AKDLGSHAKGLAPTAGSQALRTRITDPTTDSDFFAIICAQGLVPIGLSTTPEFGFALSSE
HHHHCHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHEECCCCEECCCCCCCCCCEEECCC
PPGQAPALNPFDTSLSPGGSSGGAAAAVAAGIVALAHATDAAGSIRVPAACCGLWGLKPS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCC
RAATPMGPDFGNYLMGIVGEGVLARSLRDIVTVFSPFSTKGSAPKTPRIALAIPDRCDPV
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCH
QAKAARQIAGLLEATGAEIIPTPAPDDLGREAHNIAGQILAVSLAEWLDAYGITDAEISP
HHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IAAANAARGRAMTGCQVFALTRRIQQISHSAAALFAKTDAIVMPILSGPPPPIGAFPTDL
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCH
TDVAAHLARMEAMAPNAALANIADLPALAIPLPTSQPTPTAVQLICPHGSDATLLALAAT
HHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHH
IAPPPISYPAPIAGMPQ
HCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]