| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053739
Identifier: 89053739
GI number: 89053739
Start: 1203608
End: 1204120
Strand: Reverse
Name: 89053739
Synonym: Jann_1248
Alternate gene names: NA
Gene position: 1204120-1203608 (Counterclockwise)
Preceding gene: 89053740
Following gene: 161898396
Centisome position: 27.89
GC content: 64.13
Gene sequence:
>513_bases ATGATACCTCTTATGCCGATCACGACCGAAACACCCGACGTCCCCTCGCCCACACGCGGCACGCCACGTCTGTCCCTGCG CCTGACCCCTTACCGGTCTCTCACGCCCGAAGGCTTCGTGTGGTTCATCGGCGTGACGGCGGCGCTGATTTCGCTGCCGC TTCTGGGCATCCTCGGGACATCCGTGTTCTGGGCGCTGCTGCCCTTTGTCGTCTTCGCGATCTGGGGTGTCTGGGCGGCG TTGCAGCGGTCCTGGCGGGACATGGATCTTTATGAGGACGTGATGATTTGGGACGATCTGATCCGCGTGGAGCGGCACGA GCGTCGCCACGCCCTGCGCGATTGGGAGGCGAACCCTTATTGGGTGCGCATGGTCCTCCATGCCAAAGGCGGGCCGGTGC CCAACTATCTGACGTTGCAGGGCGGCCCGAGGGAGGTGGAGTTGGGCGCGTTCCTGACCCCGCTTGAGCGGGTGGAGCTG AAGCAGCTTCTGGACCGCAATCTCAGGGTCTGA
Upstream 100 bases:
>100_bases TTACGCTACTGGTTTTGACGATCCGGGCGCTGCTCCTCCGCAGGCGCTCCAAATAACCGACCGCGACGGCTTGCCACTTG CCGCGCCGCCCGTTCGGCGC
Downstream 100 bases:
>100_bases TCGTGCCGCTCTAGGCGGGCGGCTCTGGCGGGCTCGTTTTGCCGCCCCTACTAAGCAGGCATGTTTCCCCTGCCCCTCGC ACCTGCACACAATGGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIPLMPITTETPDVPSPTRGTPRLSLRLTPYRSLTPEGFVWFIGVTAALISLPLLGILGTSVFWALLPFVVFAIWGVWAA LQRSWRDMDLYEDVMIWDDLIRVERHERRHALRDWEANPYWVRMVLHAKGGPVPNYLTLQGGPREVELGAFLTPLERVEL KQLLDRNLRV
Sequences:
>Translated_170_residues MIPLMPITTETPDVPSPTRGTPRLSLRLTPYRSLTPEGFVWFIGVTAALISLPLLGILGTSVFWALLPFVVFAIWGVWAA LQRSWRDMDLYEDVMIWDDLIRVERHERRHALRDWEANPYWVRMVLHAKGGPVPNYLTLQGGPREVELGAFLTPLERVEL KQLLDRNLRV >Mature_170_residues MIPLMPITTETPDVPSPTRGTPRLSLRLTPYRSLTPEGFVWFIGVTAALISLPLLGILGTSVFWALLPFVVFAIWGVWAA LQRSWRDMDLYEDVMIWDDLIRVERHERRHALRDWEANPYWVRMVLHAKGGPVPNYLTLQGGPREVELGAFLTPLERVEL KQLLDRNLRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19569; Mature: 19569
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLMPITTETPDVPSPTRGTPRLSLRLTPYRSLTPEGFVWFIGVTAALISLPLLGILGT CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SVFWALLPFVVFAIWGVWAALQRSWRDMDLYEDVMIWDDLIRVERHERRHALRDWEANPY HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE WVRMVLHAKGGPVPNYLTLQGGPREVELGAFLTPLERVELKQLLDRNLRV EEEEEEECCCCCCCCEEEECCCCCEEEHHHHHCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIPLMPITTETPDVPSPTRGTPRLSLRLTPYRSLTPEGFVWFIGVTAALISLPLLGILGT CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SVFWALLPFVVFAIWGVWAALQRSWRDMDLYEDVMIWDDLIRVERHERRHALRDWEANPY HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE WVRMVLHAKGGPVPNYLTLQGGPREVELGAFLTPLERVELKQLLDRNLRV EEEEEEECCCCCCCCEEEECCCCCEEEHHHHHCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA