Click here to switch to the map view.

The map label for this gene is yqaB [C]

Identifier: 89053734

GI number: 89053734

Start: 1198126

End: 1198767

Strand: Reverse

Name: yqaB [C]

Synonym: Jann_1243

Alternate gene names: 89053734

Gene position: 1198767-1198126 (Counterclockwise)

Preceding gene: 89053736

Following gene: 89053733

Centisome position: 27.76

GC content: 63.08

Gene sequence:

>642_bases
ATGGCACAGCTCACCGATATCGACACCTGGGTCTTTGACCTCGACAACACCCTGTACCCGCCCGACATGGCCCTGTTTCC
GCAGGTCAATGCCAGGATGGCGGCCTATGTGCGCGACACGCTCGGCGTGTCCCTGACCGAGGCGGAGGCCCTGCGCCACC
AGTATTATATCGAGCATGGCACGACGCTTGCGGGCCTCATGGCGTATCACGACATCGATCCGGATCCCTACCTTGTGGCC
GTCCACGACATCGACTTCTCGGTCCTGTCACCGGACCCCGCACTGGCCGATGCGATCAAAGCGCTGCCCGGGCGCAAGAT
CATCTACACCAACGGCACCGCCCCCTACGCGGAAGCCGTCGCAAGCGCGCGGGGTCTGGATGGGCTGTTTGATGCGATCT
ACGGGGTGGAGCACGCGGATTATCACCCAAAACCCTCGGCGGAGGCGTTCGACACCGTCTTCGGGAAAGAGGCGCTGACC
CCGACCAAGGCCGCGATGTTCGAGGATGAAGCGCGCAATTTGCGCGTCCCCCATGCGCTTGGCCTGACGACGATCCACGT
GGCGCCTGAACCCCTACGCGACGATTTCATCCACCATGGTACGGCGGATCTGGGGGATTTTTTGCGCCGCCTGCCTGTCT
GA

Upstream 100 bases:

>100_bases
CCGCGGAACCTGTCCAGTGACTTGCGCGCGCCCGCCACGGGCTTGCACGCACTCGGTCCATGCGCTTGCACGCGGGGTCG
GGGCGGCGTAGGCCGGGGCC

Downstream 100 bases:

>100_bases
GCCCTTCTCCACCGGGGCGGTGGTCAAACCGATCTCATGGTCCGTCGCCCCGCCCCGAGACAGAACGTCGCTTTCCCCCG
GGCCACTGCCGACATACATG

Product: pyrimidine 5-nucleotidase

Products: NA

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MAQLTDIDTWVFDLDNTLYPPDMALFPQVNARMAAYVRDTLGVSLTEAEALRHQYYIEHGTTLAGLMAYHDIDPDPYLVA
VHDIDFSVLSPDPALADAIKALPGRKIIYTNGTAPYAEAVASARGLDGLFDAIYGVEHADYHPKPSAEAFDTVFGKEALT
PTKAAMFEDEARNLRVPHALGLTTIHVAPEPLRDDFIHHGTADLGDFLRRLPV

Sequences:

>Translated_213_residues
MAQLTDIDTWVFDLDNTLYPPDMALFPQVNARMAAYVRDTLGVSLTEAEALRHQYYIEHGTTLAGLMAYHDIDPDPYLVA
VHDIDFSVLSPDPALADAIKALPGRKIIYTNGTAPYAEAVASARGLDGLFDAIYGVEHADYHPKPSAEAFDTVFGKEALT
PTKAAMFEDEARNLRVPHALGLTTIHVAPEPLRDDFIHHGTADLGDFLRRLPV
>Mature_212_residues
AQLTDIDTWVFDLDNTLYPPDMALFPQVNARMAAYVRDTLGVSLTEAEALRHQYYIEHGTTLAGLMAYHDIDPDPYLVAV
HDIDFSVLSPDPALADAIKALPGRKIIYTNGTAPYAEAVASARGLDGLFDAIYGVEHADYHPKPSAEAFDTVFGKEALTP
TKAAMFEDEARNLRVPHALGLTTIHVAPEPLRDDFIHHGTADLGDFLRRLPV

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23401; Mature: 23269

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLTDIDTWVFDLDNTLYPPDMALFPQVNARMAAYVRDTLGVSLTEAEALRHQYYIEHG
CCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
TTLAGLMAYHDIDPDPYLVAVHDIDFSVLSPDPALADAIKALPGRKIIYTNGTAPYAEAV
CHHHHHHHHHCCCCCCEEEEEEECCEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHH
ASARGLDGLFDAIYGVEHADYHPKPSAEAFDTVFGKEALTPTKAAMFEDEARNLRVPHAL
HHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCHHH
GLTTIHVAPEPLRDDFIHHGTADLGDFLRRLPV
CEEEEEECCCCHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
AQLTDIDTWVFDLDNTLYPPDMALFPQVNARMAAYVRDTLGVSLTEAEALRHQYYIEHG
CCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
TTLAGLMAYHDIDPDPYLVAVHDIDFSVLSPDPALADAIKALPGRKIIYTNGTAPYAEAV
CHHHHHHHHHCCCCCCEEEEEEECCEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHH
ASARGLDGLFDAIYGVEHADYHPKPSAEAFDTVFGKEALTPTKAAMFEDEARNLRVPHAL
HHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCHHH
GLTTIHVAPEPLRDDFIHHGTADLGDFLRRLPV
CEEEEEECCCCHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA