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The map label for this gene is srpC [H]

Identifier: 89053717

GI number: 89053717

Start: 1183035

End: 1184291

Strand: Reverse

Name: srpC [H]

Synonym: Jann_1226

Alternate gene names: 89053717

Gene position: 1184291-1183035 (Counterclockwise)

Preceding gene: 89053718

Following gene: 89053716

Centisome position: 27.43

GC content: 66.27

Gene sequence:

>1257_bases
ATGACCGCGCCCTCAACCGCAGACTTGCTCCGCATCTTTGGCCGGATCGGGCTATTGTCCTTCGGCGGGCCAGCCGCCCA
GATCGCCCTGATGCACAGGGAGTTGGTGGAGGAGCGCCCCTGGCTAACCGAACAGCAATTCCTCAGCGCGCTCAGCTTCT
GCATGCTGCTGCCGGGGCCCGAGGCGATGCAGCTGGCCACCTATGCGGGATGGCGGTTGCGCGGCACCCTCGGCGGGTTG
ATCGCGGGGCTGTTGTTCATTCTGCCGGGCGCGGCGGTGATGCTGGCCCTTGCAAGCCTGTACGCGACCTTTGGGGCGGT
GCCATTGGTCGAGGCGGTGTTTCTGGGCATCAAGGCCACCGTGATCGTGATCGTGCTTCGGGCGCTGCTGAAGGTGTCGA
AGAAGGCCCTGACAGGGACGGTGGCCTGGGTCCTGGCCGGGGCCGCGTTTGTGGCGATTTTTGTGTTCGATGTGCCCTTT
CCCTTCATCATCGCGGCGGCCGCTGCCGTGGGCACTATCGCCCTGACAGGTACAGCGCAGCCCGCCCCCGTCATTCGCGT
CTCCACCGCCCAGACCGCGCGCACCTTGGCAATCTGGGGGGCGCTGTGGCTACTGCCCCTCCTCGGGCTCGGGGTCTTCG
CCCCTCCCCTCCTCGCAGATGTGGCGCGGTTTTTTGCGACCCTTGCGGTCGTGACCTTCGGCGGGGCCTACGCCGTCTTG
GCCTACATGGTGCAGGAGGTCGTGGGGACCTATGGCTGGCTCACCACCGGGCAGATGATGGACGCCCTTGGCCTGGCCGA
AACGACGCCGGGGCCGCTGATCCTTGTGACGCAATTCGTGGGCTTCATGGCAGGACAGCAAGAGGGCGGCTGGGGCATGG
GGGCGCTGGCCGCACTTGTGACGCTCTGGGTCACGTTCACGCCCTGTTTCCTGTGGATTTTTGCGGGCGCGCCTTATGTG
GAATGGATCGCCTCCCGGCCCCGCCTGACGGGCGCCTTGCAGGGCATAACGGCGGCGGTCGTGGGCGTGATCGCCAACCT
CTCGACGTGGTTCGCGCTCAACGTCTGGTTCGGGGATGTGCAGCGCGGCCTGTTCGGCCTTTGGATGCCCGACGTTGCGA
CGATCAACCTTGCGGCCATCGCCCTGTCGGCCCTGGCCGCGGCCTTGCTGCTATGGCGCGAAATGGATTTGCTGCGCGTC
CTGGCCGTCATGGCGGTGGCGGGGATTGGCTTCAGTTATGCGGTTGCGGGCATTTGA

Upstream 100 bases:

>100_bases
TTGCGCTGAACGCGGGGCCACCATCGGCCAGTTTCCCGTTGCTCGATCAGGTCTACAACGGGGCCGTGCGCGCGACCTTG
GGCGACCGGGACGGGGTGGC

Downstream 100 bases:

>100_bases
GTGTTGACTCCCCCGGTCGCGCGGGTACAAGGCGCGCTCAACCTGTGAATATTGCGTGAGCGGCACCTGCCCTCCGCCCC
GACACCAAGGAGCCTGACAT

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTAPSTADLLRIFGRIGLLSFGGPAAQIALMHRELVEERPWLTEQQFLSALSFCMLLPGPEAMQLATYAGWRLRGTLGGL
IAGLLFILPGAAVMLALASLYATFGAVPLVEAVFLGIKATVIVIVLRALLKVSKKALTGTVAWVLAGAAFVAIFVFDVPF
PFIIAAAAAVGTIALTGTAQPAPVIRVSTAQTARTLAIWGALWLLPLLGLGVFAPPLLADVARFFATLAVVTFGGAYAVL
AYMVQEVVGTYGWLTTGQMMDALGLAETTPGPLILVTQFVGFMAGQQEGGWGMGALAALVTLWVTFTPCFLWIFAGAPYV
EWIASRPRLTGALQGITAAVVGVIANLSTWFALNVWFGDVQRGLFGLWMPDVATINLAAIALSALAAALLLWREMDLLRV
LAVMAVAGIGFSYAVAGI

Sequences:

>Translated_418_residues
MTAPSTADLLRIFGRIGLLSFGGPAAQIALMHRELVEERPWLTEQQFLSALSFCMLLPGPEAMQLATYAGWRLRGTLGGL
IAGLLFILPGAAVMLALASLYATFGAVPLVEAVFLGIKATVIVIVLRALLKVSKKALTGTVAWVLAGAAFVAIFVFDVPF
PFIIAAAAAVGTIALTGTAQPAPVIRVSTAQTARTLAIWGALWLLPLLGLGVFAPPLLADVARFFATLAVVTFGGAYAVL
AYMVQEVVGTYGWLTTGQMMDALGLAETTPGPLILVTQFVGFMAGQQEGGWGMGALAALVTLWVTFTPCFLWIFAGAPYV
EWIASRPRLTGALQGITAAVVGVIANLSTWFALNVWFGDVQRGLFGLWMPDVATINLAAIALSALAAALLLWREMDLLRV
LAVMAVAGIGFSYAVAGI
>Mature_417_residues
TAPSTADLLRIFGRIGLLSFGGPAAQIALMHRELVEERPWLTEQQFLSALSFCMLLPGPEAMQLATYAGWRLRGTLGGLI
AGLLFILPGAAVMLALASLYATFGAVPLVEAVFLGIKATVIVIVLRALLKVSKKALTGTVAWVLAGAAFVAIFVFDVPFP
FIIAAAAAVGTIALTGTAQPAPVIRVSTAQTARTLAIWGALWLLPLLGLGVFAPPLLADVARFFATLAVVTFGGAYAVLA
YMVQEVVGTYGWLTTGQMMDALGLAETTPGPLILVTQFVGFMAGQQEGGWGMGALAALVTLWVTFTPCFLWIFAGAPYVE
WIASRPRLTGALQGITAAVVGVIANLSTWFALNVWFGDVQRGLFGLWMPDVATINLAAIALSALAAALLLWREMDLLRVL
AVMAVAGIGFSYAVAGI

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 43900; Mature: 43769

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPSTADLLRIFGRIGLLSFGGPAAQIALMHRELVEERPWLTEQQFLSALSFCMLLPGP
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
EAMQLATYAGWRLRGTLGGLIAGLLFILPGAAVMLALASLYATFGAVPLVEAVFLGIKAT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
VIVIVLRALLKVSKKALTGTVAWVLAGAAFVAIFVFDVPFPFIIAAAAAVGTIALTGTAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCC
PAPVIRVSTAQTARTLAIWGALWLLPLLGLGVFAPPLLADVARFFATLAVVTFGGAYAVL
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHH
AYMVQEVVGTYGWLTTGQMMDALGLAETTPGPLILVTQFVGFMAGQQEGGWGMGALAALV
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHH
TLWVTFTPCFLWIFAGAPYVEWIASRPRLTGALQGITAAVVGVIANLSTWFALNVWFGDV
HHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRGLFGLWMPDVATINLAAIALSALAAALLLWREMDLLRVLAVMAVAGIGFSYAVAGI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure 
TAPSTADLLRIFGRIGLLSFGGPAAQIALMHRELVEERPWLTEQQFLSALSFCMLLPGP
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
EAMQLATYAGWRLRGTLGGLIAGLLFILPGAAVMLALASLYATFGAVPLVEAVFLGIKAT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
VIVIVLRALLKVSKKALTGTVAWVLAGAAFVAIFVFDVPFPFIIAAAAAVGTIALTGTAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCC
PAPVIRVSTAQTARTLAIWGALWLLPLLGLGVFAPPLLADVARFFATLAVVTFGGAYAVL
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHH
AYMVQEVVGTYGWLTTGQMMDALGLAETTPGPLILVTQFVGFMAGQQEGGWGMGALAALV
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHH
TLWVTFTPCFLWIFAGAPYVEWIASRPRLTGALQGITAAVVGVIANLSTWFALNVWFGDV
HHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRGLFGLWMPDVATINLAAIALSALAAALLLWREMDLLRVLAVMAVAGIGFSYAVAGI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]