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The map label for this gene is dppB [H]

Identifier: 89053566

GI number: 89053566

Start: 1036233

End: 1037141

Strand: Reverse

Name: dppB [H]

Synonym: Jann_1075

Alternate gene names: 89053566

Gene position: 1037141-1036233 (Counterclockwise)

Preceding gene: 89053567

Following gene: 89053565

Centisome position: 24.02

GC content: 63.48

Gene sequence:

>909_bases
ATGACCGGCTACATCCTGTCCCGCGTGTTTCGCGCCACCCTCACGATGCTGGTCACCGTCACGCTGGTGTTTTTGTTCAT
CCGCCTCTCGGGTGATCCTGCCGCCGCCCTTGTTCCGCCCGACGCACCGCAGGAGGTGATCGACCAATACACCCGCGCCA
TGGGCCTCGATCAACCGCTGTGGCAGCAATATCTGGGCTATGTGGGCGGGCTCTTGCAGGGAAATTTCGGCTTTTCGATC
CATACCGGCATCCCTGTTGAGGACACGTTCCTTGGGCGCCTGCCCTACACGCTGCATCTGGGGGTCACGGCCCTGGCGCT
GGCTGTTCTGATCGGAATTCCGGTCGGGGCGCTGGCCGCAATCCGGCGGGGCACGGCGCTTGACCGGCTGGTGATGGGGT
TTTCGGTCTTCGCCTTTGCGATGCCGAATTTCCTGTTTGGTCTGATCATGATCCTTGTGGCCGCGTTGGCGTTCAGGACC
TTTCTGGGCGGAGAGGACGCCAATGTCATCTGGCCCGCGCTGACCCTTGGCCTGGCGGCGATGGGCAGTTTTGCGCGCTT
CACCCGCTCCTCCGTTCTGGAAACGATCAACGCGCCTTACATGCGGGCGGCGGAGGCCCGCGGTGTGCCGTTCATGACGC
GCCTTGTGCGCCACGCAGCCCCCAATGCCGCGATCCCGCTGGTGACGCTGATCGGCCTGTCGCTTGGCGCATTGGTGGCC
GGATCTGTCGTGACGGAACAGGTCTTTGCCTGGCCCGGGGTCGGCCAGCTGCTTGTGCGCTCGGTGGCCACGCGGGATCT
GGCGCAGGTGCAGTTTCTGGTGCTGGTCGTGGCCTTCACGATGGTCATGGCCAACCTGATCGTCGACCTGCTGTACCTTG
TGATTGATCCAAGGATCCGGGCGAAATGA

Upstream 100 bases:

>100_bases
GCCCCGCAGGTCGCGTCTTCGATGCCCCGGACCATCCCTATACAAAGGCGCTTCTCGCTGCTGCACCGGGGCTGGAGATG
TTCCAGCAAGGCAGCGCCGC

Downstream 100 bases:

>100_bases
CGGACAGCACCCAGCCCCTCCGCGTCGGCCCCGCGATCCCGCTCAGCGTCAAACTCGCATTGGGGTTCGTGGGGATCTTC
GTGCTGTTCGCCCTGTTCGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTGYILSRVFRATLTMLVTVTLVFLFIRLSGDPAAALVPPDAPQEVIDQYTRAMGLDQPLWQQYLGYVGGLLQGNFGFSI
HTGIPVEDTFLGRLPYTLHLGVTALALAVLIGIPVGALAAIRRGTALDRLVMGFSVFAFAMPNFLFGLIMILVAALAFRT
FLGGEDANVIWPALTLGLAAMGSFARFTRSSVLETINAPYMRAAEARGVPFMTRLVRHAAPNAAIPLVTLIGLSLGALVA
GSVVTEQVFAWPGVGQLLVRSVATRDLAQVQFLVLVVAFTMVMANLIVDLLYLVIDPRIRAK

Sequences:

>Translated_302_residues
MTGYILSRVFRATLTMLVTVTLVFLFIRLSGDPAAALVPPDAPQEVIDQYTRAMGLDQPLWQQYLGYVGGLLQGNFGFSI
HTGIPVEDTFLGRLPYTLHLGVTALALAVLIGIPVGALAAIRRGTALDRLVMGFSVFAFAMPNFLFGLIMILVAALAFRT
FLGGEDANVIWPALTLGLAAMGSFARFTRSSVLETINAPYMRAAEARGVPFMTRLVRHAAPNAAIPLVTLIGLSLGALVA
GSVVTEQVFAWPGVGQLLVRSVATRDLAQVQFLVLVVAFTMVMANLIVDLLYLVIDPRIRAK
>Mature_301_residues
TGYILSRVFRATLTMLVTVTLVFLFIRLSGDPAAALVPPDAPQEVIDQYTRAMGLDQPLWQQYLGYVGGLLQGNFGFSIH
TGIPVEDTFLGRLPYTLHLGVTALALAVLIGIPVGALAAIRRGTALDRLVMGFSVFAFAMPNFLFGLIMILVAALAFRTF
LGGEDANVIWPALTLGLAAMGSFARFTRSSVLETINAPYMRAAEARGVPFMTRLVRHAAPNAAIPLVTLIGLSLGALVAG
SVVTEQVFAWPGVGQLLVRSVATRDLAQVQFLVLVVAFTMVMANLIVDLLYLVIDPRIRAK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=310, Percent_Identity=39.3548387096774, Blast_Score=211, Evalue=6e-56,
Organism=Escherichia coli, GI1789965, Length=342, Percent_Identity=35.3801169590643, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI1787497, Length=309, Percent_Identity=31.7152103559871, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1789888, Length=312, Percent_Identity=33.0128205128205, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1787761, Length=334, Percent_Identity=37.125748502994, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1787550, Length=272, Percent_Identity=27.9411764705882, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788504, Length=280, Percent_Identity=25, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32460; Mature: 32329

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGYILSRVFRATLTMLVTVTLVFLFIRLSGDPAAALVPPDAPQEVIDQYTRAMGLDQPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHH
WQQYLGYVGGLLQGNFGFSIHTGIPVEDTFLGRLPYTLHLGVTALALAVLIGIPVGALAA
HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
IRRGTALDRLVMGFSVFAFAMPNFLFGLIMILVAALAFRTFLGGEDANVIWPALTLGLAA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
MGSFARFTRSSVLETINAPYMRAAEARGVPFMTRLVRHAAPNAAIPLVTLIGLSLGALVA
HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GSVVTEQVFAWPGVGQLLVRSVATRDLAQVQFLVLVVAFTMVMANLIVDLLYLVIDPRIR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AK
CC
>Mature Secondary Structure 
TGYILSRVFRATLTMLVTVTLVFLFIRLSGDPAAALVPPDAPQEVIDQYTRAMGLDQPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHH
WQQYLGYVGGLLQGNFGFSIHTGIPVEDTFLGRLPYTLHLGVTALALAVLIGIPVGALAA
HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
IRRGTALDRLVMGFSVFAFAMPNFLFGLIMILVAALAFRTFLGGEDANVIWPALTLGLAA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
MGSFARFTRSSVLETINAPYMRAAEARGVPFMTRLVRHAAPNAAIPLVTLIGLSLGALVA
HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GSVVTEQVFAWPGVGQLLVRSVATRDLAQVQFLVLVVAFTMVMANLIVDLLYLVIDPRIR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]