Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053560

Identifier: 89053560

GI number: 89053560

Start: 1030452

End: 1031174

Strand: Reverse

Name: 89053560

Synonym: Jann_1069

Alternate gene names: NA

Gene position: 1031174-1030452 (Counterclockwise)

Preceding gene: 89053561

Following gene: 89053559

Centisome position: 23.88

GC content: 66.11

Gene sequence:

>723_bases
TTGCCTGATCTCAGCCCAAAACTGATGGCAGCGCTGGTCCTGCTGGCCGCCATCGCCTTCGCCCTCTCGCCGGTCCTGTC
CGAGCCATTCACCGGCTTCAACCCCGATCAATTGCCGCGTCCAGTCGACAACCCGCCCATCCAACCGGCGGGCTATGCCT
TCGCAATCTGGGGCGTCATCTACCTTTGGTTGATCGTCGGCGCGGGCTTCGGCCTGTTCAAACGCGCCGACACGGCGGAA
TGGCAGGCGATGCGGCCCGCGCTGCTCGTCTCCATCGCCGTGGGGGCCAGCTGGATCCCGGTGGCGCTGACTGCCCCGGT
CCCCGCCACGCTTCTGATCATCGCCATGCTGATCACCGCGTTGATCGCGCTGTTCCGCGCGCCCTTGGCTGACGCGGCTC
TCGGCGCCGCCCCTGTCGCGCTCTATGCGGGCTGGCTGTCCGCCGCCTCCATCGTTGCCAGCGCCACCATCGTGGCGGCC
TATACCGGGCTTGATCTGACCATCATCAGCATCGTCGGTCTGGTGATCATCGGCGTCGTGGCCAGCCTTGTCATCCGCTA
CACCGCCCATCCCCTGCCCTATGCCGCTGCCGTGATCTGGGCCCTCGTCGGTGTGGTCGTCACCAACTCAGACGCCGACA
CCATGTTCGTCCTCGGCGCCGCCGTTGGCATTATTATCGTGGTTGCGTTCCGCACCGTTCAGCGTCTCCGCCCGCAGACC
TGA

Upstream 100 bases:

>100_bases
GTGCTGGAAAATGGGCAAAACGCCGACGGATCTGTCACCCTGCCCGCCGCCCTGCACCCCTGGCTCGGCGGCAAAACCCG
GATCACAGCGGAGGGCAATC

Downstream 100 bases:

>100_bases
CGCCACATCATCCTCACGCCTCCTTCATCTGGGCAAGGACACCTCCCCGCGGAGCGTCCCGCAGCCCACCCCGCCTTGCC
GCGCTCGCAGGCACAAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MPDLSPKLMAALVLLAAIAFALSPVLSEPFTGFNPDQLPRPVDNPPIQPAGYAFAIWGVIYLWLIVGAGFGLFKRADTAE
WQAMRPALLVSIAVGASWIPVALTAPVPATLLIIAMLITALIALFRAPLADAALGAAPVALYAGWLSAASIVASATIVAA
YTGLDLTIISIVGLVIIGVVASLVIRYTAHPLPYAAAVIWALVGVVVTNSDADTMFVLGAAVGIIIVVAFRTVQRLRPQT

Sequences:

>Translated_240_residues
MPDLSPKLMAALVLLAAIAFALSPVLSEPFTGFNPDQLPRPVDNPPIQPAGYAFAIWGVIYLWLIVGAGFGLFKRADTAE
WQAMRPALLVSIAVGASWIPVALTAPVPATLLIIAMLITALIALFRAPLADAALGAAPVALYAGWLSAASIVASATIVAA
YTGLDLTIISIVGLVIIGVVASLVIRYTAHPLPYAAAVIWALVGVVVTNSDADTMFVLGAAVGIIIVVAFRTVQRLRPQT
>Mature_239_residues
PDLSPKLMAALVLLAAIAFALSPVLSEPFTGFNPDQLPRPVDNPPIQPAGYAFAIWGVIYLWLIVGAGFGLFKRADTAEW
QAMRPALLVSIAVGASWIPVALTAPVPATLLIIAMLITALIALFRAPLADAALGAAPVALYAGWLSAASIVASATIVAAY
TGLDLTIISIVGLVIIGVVASLVIRYTAHPLPYAAAVIWALVGVVVTNSDADTMFVLGAAVGIIIVVAFRTVQRLRPQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24930; Mature: 24799

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLSPKLMAALVLLAAIAFALSPVLSEPFTGFNPDQLPRPVDNPPIQPAGYAFAIWGVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH
YLWLIVGAGFGLFKRADTAEWQAMRPALLVSIAVGASWIPVALTAPVPATLLIIAMLITA
HHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHH
LIALFRAPLADAALGAAPVALYAGWLSAASIVASATIVAAYTGLDLTIISIVGLVIIGVV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASLVIRYTAHPLPYAAAVIWALVGVVVTNSDADTMFVLGAAVGIIIVVAFRTVQRLRPQT
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDLSPKLMAALVLLAAIAFALSPVLSEPFTGFNPDQLPRPVDNPPIQPAGYAFAIWGVI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH
YLWLIVGAGFGLFKRADTAEWQAMRPALLVSIAVGASWIPVALTAPVPATLLIIAMLITA
HHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHH
LIALFRAPLADAALGAAPVALYAGWLSAASIVASATIVAAYTGLDLTIISIVGLVIIGVV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASLVIRYTAHPLPYAAAVIWALVGVVVTNSDADTMFVLGAAVGIIIVVAFRTVQRLRPQT
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA