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The map label for this gene is 89053369

Identifier: 89053369

GI number: 89053369

Start: 833844

End: 834545

Strand: Reverse

Name: 89053369

Synonym: Jann_0878

Alternate gene names: NA

Gene position: 834545-833844 (Counterclockwise)

Preceding gene: 89053370

Following gene: 89053368

Centisome position: 19.33

GC content: 61.82

Gene sequence:

>702_bases
ATGCAGCGCCAGATCCGCCTTGCCGAGATTGTGGAGATCGTCCGGGATGGACGTCTCCACCTTGCACGGGACATCGCTGA
CGCTTTGGACGTGTCGCAGCGCACGATCTATCGGGACATCGACACGCTTGTCGCCAACGGTGTTCCGATAGATGGCGAAC
GCGGGGTTGGCTATATCCTGCGAGAGCCGGTGTTTCTGCCGCCCATGTCGCTGTCGCTGACAGAGTTGGAAGCGCTCAGT
CTTGGCATGGCGATTGTGCAGGAGGCGGCGGACGAAGAACTTCAGGCCGCGGCACTTTCGGTGATGGAGAAGGTCGGCGA
CCATGCCTCCAACCGTCGCCGCGCGCCAAAATCCTGGGGGTTCGGCGTCTATGCCTTTGAACGGGCACAGGAGGGGTTCA
AACACATGCCGCTTCTGCGCCGCGCGATCCGCGAAGGACTGAAGCTGCGCATCGACTACCTGTCACTCGCCGGAGAGGCG
TCCAGCCGCGTGATCCGCCCCTTGCAAACCGACTATTGGGGCCGGGTGTGGACCTGCTCGGCCTGGTGCGAAACGCGGCG
GGCCTTTCGCGCATTCCGCATCGACCGGATGCAGGAATGCGACGCGACCGGCCAAACATTCCAGCCCGAGGCTGGCAAAA
CAATCGAGGATTACTTGCGCCATGTCGCAGAGCAAATGGATCGAGACGGATACCGTTCATGA

Upstream 100 bases:

>100_bases
ATCGGCAACGCACCCGGCAATGCAAATTTCCTGTCCGCGATCAACTGACCCACTGTCCAACTCACCCACTCCGAGTTGGA
AGTCGCCATCAACTGACGCA

Downstream 100 bases:

>100_bases
CCACATCAGCACCCTAGAGGGCGTTATCCCAAAGGACGCTTGGGGCGAGACGTCGTATTTCTATAACCCCGGCCGCATCT
TCGAGCGTGGCACCTACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; DeoR-Family Transcriptional Regulator; Regulatory Protein; Repressor Transcription Regulator Protein; DeoR Family Transriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Bacterial Regulatory Protein DeoR Family; NB-Dependent Receptor; Transcriptional Regulator Protein; LOW QUALITY PROTEIN Helix-Turn-Helix Type

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MQRQIRLAEIVEIVRDGRLHLARDIADALDVSQRTIYRDIDTLVANGVPIDGERGVGYILREPVFLPPMSLSLTELEALS
LGMAIVQEAADEELQAAALSVMEKVGDHASNRRRAPKSWGFGVYAFERAQEGFKHMPLLRRAIREGLKLRIDYLSLAGEA
SSRVIRPLQTDYWGRVWTCSAWCETRRAFRAFRIDRMQECDATGQTFQPEAGKTIEDYLRHVAEQMDRDGYRS

Sequences:

>Translated_233_residues
MQRQIRLAEIVEIVRDGRLHLARDIADALDVSQRTIYRDIDTLVANGVPIDGERGVGYILREPVFLPPMSLSLTELEALS
LGMAIVQEAADEELQAAALSVMEKVGDHASNRRRAPKSWGFGVYAFERAQEGFKHMPLLRRAIREGLKLRIDYLSLAGEA
SSRVIRPLQTDYWGRVWTCSAWCETRRAFRAFRIDRMQECDATGQTFQPEAGKTIEDYLRHVAEQMDRDGYRS
>Mature_233_residues
MQRQIRLAEIVEIVRDGRLHLARDIADALDVSQRTIYRDIDTLVANGVPIDGERGVGYILREPVFLPPMSLSLTELEALS
LGMAIVQEAADEELQAAALSVMEKVGDHASNRRRAPKSWGFGVYAFERAQEGFKHMPLLRRAIREGLKLRIDYLSLAGEA
SSRVIRPLQTDYWGRVWTCSAWCETRRAFRAFRIDRMQECDATGQTFQPEAGKTIEDYLRHVAEQMDRDGYRS

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26542; Mature: 26542

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRQIRLAEIVEIVRDGRLHLARDIADALDVSQRTIYRDIDTLVANGVPIDGERGVGYIL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
REPVFLPPMSLSLTELEALSLGMAIVQEAADEELQAAALSVMEKVGDHASNRRRAPKSWG
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FGVYAFERAQEGFKHMPLLRRAIREGLKLRIDYLSLAGEASSRVIRPLQTDYWGRVWTCS
CHHHHHHHHHHHHHCCHHHHHHHHHHHHEEHHHHHHCCHHHHHHHHHHHHHHCCCEEEHH
AWCETRRAFRAFRIDRMQECDATGQTFQPEAGKTIEDYLRHVAEQMDRDGYRS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQRQIRLAEIVEIVRDGRLHLARDIADALDVSQRTIYRDIDTLVANGVPIDGERGVGYIL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
REPVFLPPMSLSLTELEALSLGMAIVQEAADEELQAAALSVMEKVGDHASNRRRAPKSWG
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FGVYAFERAQEGFKHMPLLRRAIREGLKLRIDYLSLAGEASSRVIRPLQTDYWGRVWTCS
CHHHHHHHHHHHHHCCHHHHHHHHHHHHEEHHHHHHCCHHHHHHHHHHHHHHCCCEEEHH
AWCETRRAFRAFRIDRMQECDATGQTFQPEAGKTIEDYLRHVAEQMDRDGYRS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA