| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053340
Identifier: 89053340
GI number: 89053340
Start: 803997
End: 804989
Strand: Reverse
Name: 89053340
Synonym: Jann_0849
Alternate gene names: NA
Gene position: 804989-803997 (Counterclockwise)
Preceding gene: 89053341
Following gene: 89053339
Centisome position: 18.64
GC content: 65.86
Gene sequence:
>993_bases ATGACCCTCAGCTTCGATATCGACACGCCGGGCAAGACCTACGGCCATGTCCGCATCCCCCATTCCGCTGACGACAGCGC CTGGGGCCATGTCATGATCCCCATTGTCGTGATCAACGGCACCCGTCCGGGCCCCACCGCGCTGGTGATTGGTGGCACCC ATGGGGACGAATACGAAGGTCCCCTCGCCATCCGCCATCTGATCGATGCCGCCACACCCGAGGCGATCCTGGGGCGCCTC ATTGCCATCCCCTACCTCAACACCCCCGCCTTTCACGCCGCCACGCGGACGTCGCCCATCGACGCCGTGAATCTCAACCG GGCCTTTCCGGGCAATCCCTCCGGCACTGTCACGGAAAAGATCGCGGCCGTCGTAAACGACCACCTCATTCCGCTGTCCG ATTTGGTCATCGACATCCACTCGGGCGGCAAAACCCTCGACTTCCTGCCCATGGCGATCAGCCACATCCTTGACGATGCC GAACAGGACGCCCGCTGCGCCGCCGCCGCCCGGTCCTTCGGCGCGCCCTGGACCGCCCGCCTGCGCGAAATTGACGATGC CGGTATGCTGGACGGCGCGGCAGAGCGGGCGAGCAAGACTTTTGTCACGACCGAAATCGGCGGCGCGGGCACGGCGACGC CCCAAAGCGCCGAGATTGCCATCGCGGGCCTGCGCCGTGTGCTCGCCCACCATATGACCTATGATTGGCCGGCGGCACCC GCCCCCTCCCGCGCGCTGGATCTGTCGGACCCCGGCGGCTTCCACGTTGCGACGCATGGGGGTCTCGTGCATCCTCTCGT GGCCCTCGGCGATACAATTGAGCCGGGTCAACCGCTCGCCCATATCTATAATACCTCTGATCTCGAAACGGTCCGCAAAA CCATTTACGCCCAACGCGCGGGGCGTCTTGCGGCGCGCCACGTGCCCGGCCTGATCAAACCGGGCGATTGCGCGTTTGTC ATCGGCACCGATGGTGGGCCCCTGCCCGCCTAG
Upstream 100 bases:
>100_bases TGCCTGTCGTCCCTGCCCCGCGAAGTCTTCGTCAAATGACAGCTGCGAGGAGGAGCCGGAGGCCCCGAGGAGGCGCTGAC AGCCCGCAAGGACCCACCCC
Downstream 100 bases:
>100_bases GGCGTTAACCAGATCTGTAAAATTGTCTGTTTCCAATCGGCCGCTTGTTGCGGCGGTGTTGCGTGGATATCTCCCTCATG CCCCCAAGGCAGACGCCGAT
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Deacylase; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinate Dehydrogenase Subunit; Succinylglutamatedesuccinylase/Aspartoacylase; Deacylase-Like; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTLSFDIDTPGKTYGHVRIPHSADDSAWGHVMIPIVVINGTRPGPTALVIGGTHGDEYEGPLAIRHLIDAATPEAILGRL IAIPYLNTPAFHAATRTSPIDAVNLNRAFPGNPSGTVTEKIAAVVNDHLIPLSDLVIDIHSGGKTLDFLPMAISHILDDA EQDARCAAAARSFGAPWTARLREIDDAGMLDGAAERASKTFVTTEIGGAGTATPQSAEIAIAGLRRVLAHHMTYDWPAAP APSRALDLSDPGGFHVATHGGLVHPLVALGDTIEPGQPLAHIYNTSDLETVRKTIYAQRAGRLAARHVPGLIKPGDCAFV IGTDGGPLPA
Sequences:
>Translated_330_residues MTLSFDIDTPGKTYGHVRIPHSADDSAWGHVMIPIVVINGTRPGPTALVIGGTHGDEYEGPLAIRHLIDAATPEAILGRL IAIPYLNTPAFHAATRTSPIDAVNLNRAFPGNPSGTVTEKIAAVVNDHLIPLSDLVIDIHSGGKTLDFLPMAISHILDDA EQDARCAAAARSFGAPWTARLREIDDAGMLDGAAERASKTFVTTEIGGAGTATPQSAEIAIAGLRRVLAHHMTYDWPAAP APSRALDLSDPGGFHVATHGGLVHPLVALGDTIEPGQPLAHIYNTSDLETVRKTIYAQRAGRLAARHVPGLIKPGDCAFV IGTDGGPLPA >Mature_329_residues TLSFDIDTPGKTYGHVRIPHSADDSAWGHVMIPIVVINGTRPGPTALVIGGTHGDEYEGPLAIRHLIDAATPEAILGRLI AIPYLNTPAFHAATRTSPIDAVNLNRAFPGNPSGTVTEKIAAVVNDHLIPLSDLVIDIHSGGKTLDFLPMAISHILDDAE QDARCAAAARSFGAPWTARLREIDDAGMLDGAAERASKTFVTTEIGGAGTATPQSAEIAIAGLRRVLAHHMTYDWPAAPA PSRALDLSDPGGFHVATHGGLVHPLVALGDTIEPGQPLAHIYNTSDLETVRKTIYAQRAGRLAARHVPGLIKPGDCAFVI GTDGGPLPA
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34566; Mature: 34434
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSFDIDTPGKTYGHVRIPHSADDSAWGHVMIPIVVINGTRPGPTALVIGGTHGDEYEG CEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCC PLAIRHLIDAATPEAILGRLIAIPYLNTPAFHAATRTSPIDAVNLNRAFPGNPSGTVTEK HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCHHHHH IAAVVNDHLIPLSDLVIDIHSGGKTLDFLPMAISHILDDAEQDARCAAAARSFGAPWTAR HHHHHHCCCCCHHHEEEEECCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH LREIDDAGMLDGAAERASKTFVTTEIGGAGTATPQSAEIAIAGLRRVLAHHMTYDWPAAP HHHCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC APSRALDLSDPGGFHVATHGGLVHPLVALGDTIEPGQPLAHIYNTSDLETVRKTIYAQRA CCCCEEECCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHEEECCHHHHHHHHHHHHHHH GRLAARHVPGLIKPGDCAFVIGTDGGPLPA HHHHHHHCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure TLSFDIDTPGKTYGHVRIPHSADDSAWGHVMIPIVVINGTRPGPTALVIGGTHGDEYEG EEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCC PLAIRHLIDAATPEAILGRLIAIPYLNTPAFHAATRTSPIDAVNLNRAFPGNPSGTVTEK HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCHHHHH IAAVVNDHLIPLSDLVIDIHSGGKTLDFLPMAISHILDDAEQDARCAAAARSFGAPWTAR HHHHHHCCCCCHHHEEEEECCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH LREIDDAGMLDGAAERASKTFVTTEIGGAGTATPQSAEIAIAGLRRVLAHHMTYDWPAAP HHHCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC APSRALDLSDPGGFHVATHGGLVHPLVALGDTIEPGQPLAHIYNTSDLETVRKTIYAQRA CCCCEEECCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHEEECCHHHHHHHHHHHHHHH GRLAARHVPGLIKPGDCAFVIGTDGGPLPA HHHHHHHCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA