Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053296

Identifier: 89053296

GI number: 89053296

Start: 766710

End: 767417

Strand: Reverse

Name: 89053296

Synonym: Jann_0805

Alternate gene names: NA

Gene position: 767417-766710 (Counterclockwise)

Preceding gene: 89053297

Following gene: 89053295

Centisome position: 17.77

GC content: 61.02

Gene sequence:

>708_bases
ATGACGTTTAAGACACTTATCGGCGCCGTTGCGCTGGCCTTGGCGGCCGGGACTGTCAACGCAGCGACGATCACGTTCAA
CACATTCAACATTGGCGAATTCAACACCGCGGTAAACGGTGGCACCGTTGAAGACTTCGAAGGCTTTGCTGGTGGCACGG
GCTGGAATTCTTCCACAGTGACCAGCGTTGGCACCTTCGCGGCCAACACGGGAACGGGCTCCGGCTCGGTATGCAACACC
CAGAGCGGCGGCAATTGCACCGACCTGTTCATCAATGACACAACCCTCAGCGGGCAGGGCAACCTTGTTCCGGCCGGTGC
TGGAAACGCTCTGTCGTCCAATGACACCAACGGCATCTTCTGGGACGTGTTTCTCGCTGGCAACGCGATGTTCAACCGGA
TCGTCTTTGCCGTGAACGATGCAGCAGACCTGAACAACACCATCTTTACCGTGCTGACCGACGACGGCTCGTCCGCCACG
CTGTCCGGCCAGGCAAACGGCAATGAGCAGTTGGTAGTGATCGACCTCGGTGGGATGGTCTCCAGCGCGACTGTGTCGAT
GTTCAACAACCGCACCAATGACGGGTTCACGATCGACGGTGCCGCTGCCACGGTCGCTCCCGTTCCGCTGCCCGCCGGTG
CCGTGCTGCTTTTGGGTGGCCTTGGTGCTCTGGCCGTCATGCGCCGTCGCCGCGCCGCAGCCGCCTGA

Upstream 100 bases:

>100_bases
CAGAGCCTTTCATCGGACGGACATGTCAGCTAAGCGGACATCAATATCGTAACGAGTGCGCGGGTTTCCGCCTGCGAACA
GCTTAAAGAGGGGAAAAATT

Downstream 100 bases:

>100_bases
GCGCAGGCCTGCCATTCAATTCGAAAGGGCGTCCTCTGGGGCGCCCTTTTTTTGTTCGGATTCGCGCGGCCGTCCTGCGA
CCATCCGCGCGCGCGCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTFKTLIGAVALALAAGTVNAATITFNTFNIGEFNTAVNGGTVEDFEGFAGGTGWNSSTVTSVGTFAANTGTGSGSVCNT
QSGGNCTDLFINDTTLSGQGNLVPAGAGNALSSNDTNGIFWDVFLAGNAMFNRIVFAVNDAADLNNTIFTVLTDDGSSAT
LSGQANGNEQLVVIDLGGMVSSATVSMFNNRTNDGFTIDGAAATVAPVPLPAGAVLLLGGLGALAVMRRRRAAAA

Sequences:

>Translated_235_residues
MTFKTLIGAVALALAAGTVNAATITFNTFNIGEFNTAVNGGTVEDFEGFAGGTGWNSSTVTSVGTFAANTGTGSGSVCNT
QSGGNCTDLFINDTTLSGQGNLVPAGAGNALSSNDTNGIFWDVFLAGNAMFNRIVFAVNDAADLNNTIFTVLTDDGSSAT
LSGQANGNEQLVVIDLGGMVSSATVSMFNNRTNDGFTIDGAAATVAPVPLPAGAVLLLGGLGALAVMRRRRAAAA
>Mature_234_residues
TFKTLIGAVALALAAGTVNAATITFNTFNIGEFNTAVNGGTVEDFEGFAGGTGWNSSTVTSVGTFAANTGTGSGSVCNTQ
SGGNCTDLFINDTTLSGQGNLVPAGAGNALSSNDTNGIFWDVFLAGNAMFNRIVFAVNDAADLNNTIFTVLTDDGSSATL
SGQANGNEQLVVIDLGGMVSSATVSMFNNRTNDGFTIDGAAATVAPVPLPAGAVLLLGGLGALAVMRRRRAAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23492; Mature: 23361

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKTLIGAVALALAAGTVNAATITFNTFNIGEFNTAVNGGTVEDFEGFAGGTGWNSSTV
CCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCE
TSVGTFAANTGTGSGSVCNTQSGGNCTDLFINDTTLSGQGNLVPAGAGNALSSNDTNGIF
EEEEEEEECCCCCCCCEECCCCCCCEEEEEEECEEECCCCCEEECCCCCCCCCCCCCCEE
WDVFLAGNAMFNRIVFAVNDAADLNNTIFTVLTDDGSSATLSGQANGNEQLVVIDLGGMV
EEEEECCCHHHEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCC
SSATVSMFNNRTNDGFTIDGAAATVAPVPLPAGAVLLLGGLGALAVMRRRRAAAA
CHHEEEECCCCCCCCEEECCCCEEEECCCCCCCHHEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFKTLIGAVALALAAGTVNAATITFNTFNIGEFNTAVNGGTVEDFEGFAGGTGWNSSTV
CHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCE
TSVGTFAANTGTGSGSVCNTQSGGNCTDLFINDTTLSGQGNLVPAGAGNALSSNDTNGIF
EEEEEEEECCCCCCCCEECCCCCCCEEEEEEECEEECCCCCEEECCCCCCCCCCCCCCEE
WDVFLAGNAMFNRIVFAVNDAADLNNTIFTVLTDDGSSATLSGQANGNEQLVVIDLGGMV
EEEEECCCHHHEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCC
SSATVSMFNNRTNDGFTIDGAAATVAPVPLPAGAVLLLGGLGALAVMRRRRAAAA
CHHEEEECCCCCCCCEEECCCCEEEECCCCCCCHHEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA