| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053278
Identifier: 89053278
GI number: 89053278
Start: 749016
End: 749330
Strand: Reverse
Name: 89053278
Synonym: Jann_0787
Alternate gene names: NA
Gene position: 749330-749016 (Counterclockwise)
Preceding gene: 89053279
Following gene: 89053277
Centisome position: 17.35
GC content: 63.49
Gene sequence:
>315_bases ATGACCATCCTGACGCCCGGTTTCATCCTCATCGCACTTGTTGTCCTGGCCGTGTTTCTCGCCGCCGCTCCGGCCAGGAA ACGGGTTGACCGTGCGCGCCGGGATCTGTCTGCCGAAGACCTCAAGACCTTTGGCGACACGTACCGCAACCGCGCCAACC GCCACGACATGCCCTCTAAATACAACCGGTTTGCCCAAGCCTCGGACACGGCCAGCCGGATCTGGGTGATCGGCGTTGTG GCCATCATTGCCGCCCTCGCCGCCTACATTTTTCTCGGCCCCACCCTCGGCCTGCCCATCGGAGGCACCCCATGA
Upstream 100 bases:
>100_bases GTGGCCGAAGCCAGTGACCGCGCGCGCCCGGTGACCATCGCGGCCTGTGCGGCCAGTGCCGCGTCCATCGCTGCCTACAT CCTGATCGGGGGATAGCGCC
Downstream 100 bases:
>100_bases CCACCGCCACGATTTTTGAGACTATGGATTACGGCCCCGCCCCGGAAAGCGCTGCTGAGGCGCGGGCCTGGCTGGCGGAT CGCGGCGGCATCGCAGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTILTPGFILIALVVLAVFLAAAPARKRVDRARRDLSAEDLKTFGDTYRNRANRHDMPSKYNRFAQASDTASRIWVIGVV AIIAALAAYIFLGPTLGLPIGGTP
Sequences:
>Translated_104_residues MTILTPGFILIALVVLAVFLAAAPARKRVDRARRDLSAEDLKTFGDTYRNRANRHDMPSKYNRFAQASDTASRIWVIGVV AIIAALAAYIFLGPTLGLPIGGTP >Mature_103_residues TILTPGFILIALVVLAVFLAAAPARKRVDRARRDLSAEDLKTFGDTYRNRANRHDMPSKYNRFAQASDTASRIWVIGVVA IIAALAAYIFLGPTLGLPIGGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11269; Mature: 11138
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILTPGFILIALVVLAVFLAAAPARKRVDRARRDLSAEDLKTFGDTYRNRANRHDMPSK CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHH YNRFAQASDTASRIWVIGVVAIIAALAAYIFLGPTLGLPIGGTP HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TILTPGFILIALVVLAVFLAAAPARKRVDRARRDLSAEDLKTFGDTYRNRANRHDMPSK CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHH YNRFAQASDTASRIWVIGVVAIIAALAAYIFLGPTLGLPIGGTP HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA