| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053255
Identifier: 89053255
GI number: 89053255
Start: 726566
End: 727189
Strand: Reverse
Name: 89053255
Synonym: Jann_0764
Alternate gene names: NA
Gene position: 727189-726566 (Counterclockwise)
Preceding gene: 89053256
Following gene: 89053251
Centisome position: 16.84
GC content: 65.06
Gene sequence:
>624_bases ATGCGCCGCGCCCTGCCGTTTCTTCTGATCTTTGCCGCCTCTCCCGCTATGTCCCAGCCCACCTGTGAAGCCCCCAGCGG ACCGCTGGAAACTTGCCTGGTGGGCGCGTGGATCGGCACCTCCACCATACCGCAGGCCCTGCAAAGCGCAATGTCCGCGA TGCCCGACAACGTCCGGGCCAATTTCAGCAGTCTGGGCCAGCCCATCGGAATGATCATCTATGACGACGGTTTCTTCGAG ACCTTCCCCCTCGGCGCGGAGGGCGCGGCGCAGTTCCAGGACAGTGAAGGCGATCTGACCACATTCGAGATGACGGGCCA GACCGTGACCACCGCAGGCTATATGTCGGCCATCGGCGGGACGCTGGACCTGTGCTATCTGCCCGGCGCGCAAGGTAACC TGAACGGAGAGATGACGGTCACGACCGACGGCACCAGCACCACCGTGCCGCTGTTCGCGATCCCGGAGAACACGTTTAGC CCGGTGATCACCTATACCTGCGCGGGCGACCGGATGCAGCAGAACGTGGCCCTGCCCGCGCCCATCGGCACGATCTCCTA CGACCTGGTCCGCGTGCCGCTGGACGCGTTCCCCTCCATCCGCCGCACCGGGGTGGAGGATTAG
Upstream 100 bases:
>100_bases CCCTCATTTTTGGATTGATCTCCAAGGGGAGCGCACCCATCCCGGCGGATCGTGCCCCCCGTTTGCGTGCCAATCACCGT TTGTCTGAAAGGATCATCCC
Downstream 100 bases:
>100_bases GCCCGCCGCTTCACCGACCGGATGTATCTGGCGGCGCTGCGAAAGTGGCTTGATCCGGCGGCTTCTGCGTAGCGCCCGCG GGTCCAGCCCGTGCCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRRALPFLLIFAASPAMSQPTCEAPSGPLETCLVGAWIGTSTIPQALQSAMSAMPDNVRANFSSLGQPIGMIIYDDGFFE TFPLGAEGAAQFQDSEGDLTTFEMTGQTVTTAGYMSAIGGTLDLCYLPGAQGNLNGEMTVTTDGTSTTVPLFAIPENTFS PVITYTCAGDRMQQNVALPAPIGTISYDLVRVPLDAFPSIRRTGVED
Sequences:
>Translated_207_residues MRRALPFLLIFAASPAMSQPTCEAPSGPLETCLVGAWIGTSTIPQALQSAMSAMPDNVRANFSSLGQPIGMIIYDDGFFE TFPLGAEGAAQFQDSEGDLTTFEMTGQTVTTAGYMSAIGGTLDLCYLPGAQGNLNGEMTVTTDGTSTTVPLFAIPENTFS PVITYTCAGDRMQQNVALPAPIGTISYDLVRVPLDAFPSIRRTGVED >Mature_207_residues MRRALPFLLIFAASPAMSQPTCEAPSGPLETCLVGAWIGTSTIPQALQSAMSAMPDNVRANFSSLGQPIGMIIYDDGFFE TFPLGAEGAAQFQDSEGDLTTFEMTGQTVTTAGYMSAIGGTLDLCYLPGAQGNLNGEMTVTTDGTSTTVPLFAIPENTFS PVITYTCAGDRMQQNVALPAPIGTISYDLVRVPLDAFPSIRRTGVED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21822; Mature: 21822
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRALPFLLIFAASPAMSQPTCEAPSGPLETCLVGAWIGTSTIPQALQSAMSAMPDNVRA CCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHEEHHHCCCHHHHHHHHHHHHHCCCCCCC NFSSLGQPIGMIIYDDGFFETFPLGAEGAAQFQDSEGDLTTFEMTGQTVTTAGYMSAIGG CHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHCCC TLDLCYLPGAQGNLNGEMTVTTDGTSTTVPLFAIPENTFSPVITYTCAGDRMQQNVALPA CEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCHHHCCCCCCC PIGTISYDLVRVPLDAFPSIRRTGVED CCCCCEEEEEECCHHHCCHHHHCCCCC >Mature Secondary Structure MRRALPFLLIFAASPAMSQPTCEAPSGPLETCLVGAWIGTSTIPQALQSAMSAMPDNVRA CCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHEEHHHCCCHHHHHHHHHHHHHCCCCCCC NFSSLGQPIGMIIYDDGFFETFPLGAEGAAQFQDSEGDLTTFEMTGQTVTTAGYMSAIGG CHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHCCC TLDLCYLPGAQGNLNGEMTVTTDGTSTTVPLFAIPENTFSPVITYTCAGDRMQQNVALPA CEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCHHHCCCCCCC PIGTISYDLVRVPLDAFPSIRRTGVED CCCCCEEEEEECCHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA