| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053177
Identifier: 89053177
GI number: 89053177
Start: 658998
End: 661064
Strand: Direct
Name: 89053177
Synonym: Jann_0686
Alternate gene names: NA
Gene position: 658998-661064 (Clockwise)
Preceding gene: 89053176
Following gene: 89053181
Centisome position: 15.26
GC content: 65.8
Gene sequence:
>2067_bases ATGGCAAACCAGATCCTCTTTGATCCGCTGCTGGACTGGCCCTTGCTCTATGGACTGGGGGCGGCGCTGGTTCTGATCAT CGCCCTGTCGATCTGGCGTGGCCTGTCGGGTTGGCCGTATCGCCTTCTGGCGGGCGCGGCGCTTCTGGCCGCGTTGATCA ACCCGTCGCTCCAGACGGAAGACCGCGAACCCCTGTCGGATATCGTGCTGCTGGTCGTCGACGAAAGCGCCAGCCAGCGG ATATCCGACCGTCCTTCGCAAACGGCGGACGCATTGGAGGCGTTGGAGGCGGAGGTTGAGGCGTTGGGCATGGAAACCCG CGTGGCCCGTGTGGGCGATGCGGACGACAATTCCGGCACACTTCTGATGACGGAATTGCAGCGCCTGATGGCGGAAGAGC CGCGCGCACGGATAGCGGGGGCGTTGATCATCACCGATGGACGGCTCCATGACCCGGAGCTGGTGCCGGATATGCCCGCG CCGATCCACGCCCTGATCACGGGGCTTGAGACGGATTGGGACCGCCGCCTGGTGATTGAGACCGCGCCTGCCTTCGGTAT CATTGGCGAGGAATTGCTGCTCACGATCCGGCTGGAGGACCAGGGGGCGGTGCCCGCGGGCCTTGAGGGACGCTCGCAGA TCGTGATCGCCGTCGATGGCGGGCCGCCGCAGACCTACGTGGTGCCGGTCGGCGAAAGTCTGGAATTGCCCCTGACGCTG GAACATGCCGGTCAAAACGTGATCCAGTTCACCGTGCCGGAGGCGGAGGGCGAGTTGACGACGCGCAACAACGCCGCCGT CGTGCAGATCAACGGCATCCGCGACCGCCTGCGCGTGTTGCTGGTCTCGGGTGAGCCGCATCCCGGTCAACGCACGTGGC GCAACCTGCTGAAATCCGATCCGTCGGTGGATCTGGTCCACTTCACCATCCTGCGCCCGCCCGACCGCCAGGATGGTGTG CCCGTCGGCGAGTTGTCCCTGATCGCCTTCCCCACGCGGGAATTGTTCATGGAGGCCGTGGATGAATTCGACCTGATCAT CTTCGACCGCTACCAGCGCCGGGGCATCCTGCCGATGGTCTATATCGACAATATCCGCCGCTACGTGGAAGACGGTGGCG CGCTGTTGTTGGCTGCGGGGCCGGATTTTGCGGGGGCCTCGTCGCTCTACCGCACGCCGCTCTCGGACATTCTGCCGGGC CGCCCCACGGCCCGCGTGATTGAGGAGCCATATGTGCCGCTGATCAGCGAATTGGGCGCGCGGCATCCGGTGACGACGGG TCTGGAAGGGGAGCATACGCCGCTGCCGGGCAGTGACGATCCCTGGGGCCGCTGGCTGCGCCAGATCGAGTTGACAGAAC AGGGTGGCCAGACGGTCATGGAAGGGGCAGGTGGCGCGCCGCTCCTGATGTTGGATCGTGTCGGGCAGGGGCGCGTGGCG CTGCTGGCCTCGGATCATGCCTGGCTCTGGGATCGTGGGTATGAAGGCGGCGGGCCGCAACTGGAATTGCTGCGCCGCCT GGCCCATTGGATGATGGGCGAGCCCGACCTTGAGGAAGAGGCGCTGGTGGCCGATGTCGATGGCCAGACCATCACGATCA CCCGCCGGACGCTGGCCGATGAGGTAGGCTCCGTCATCGTCACCACACCCGATGGTGAGCAGTTGGAAGTGATGCTGGAA GAGACCGCACCGGGGGCCTTCACGGCCCAGATCGAGGGCTTGGAGCAGGGGCTTTACCGTTTGGTGGAAAGCGATCTGGA GCGCGTTATTGCCCTAGGACCCGCCGCGCCGCGCGAATTTGAGGTCACGATTGCCGGGGCCGAGCGGATTGACCCGCTGC TGGACGCGGAAGGCGGACGCTCGGTGCGTCTGGAAGATGGCCTGCCGGACCTGCGCCGCGTGTCTGAGGGACGCACGGCC CATGGGCGCGGATGGCTGGGGCTGACCACGCGGGAGGCTTACGTCACCACGGACGTGACCGTGACTCCGTTCATTCAGGC CTGGGTGTTCCTGCTTCTGGCGGCGGGTCTGATGCTGGCAGGCTGGTTGCGCGAAGGGCGTCAGTAG
Upstream 100 bases:
>100_bases TGCGCTTCGGCGTGAACCTCGTGATGCACGTGCTCAGCGGCAATTACAAATCGGATCAGGTCCATGTGCCTGCGCTTTTG GACAGGCTGGGGCAATAGAT
Downstream 100 bases:
>100_bases CGGCTTGACGGGTGTCGCCTTGCCTTCGGCAATGGCGACCGGGCGAGGGGGAAACCCCCTCGCGCTCCCCCGAGATGCGC AACCGCGAGAGACTCCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MANQILFDPLLDWPLLYGLGAALVLIIALSIWRGLSGWPYRLLAGAALLAALINPSLQTEDREPLSDIVLLVVDESASQR ISDRPSQTADALEALEAEVEALGMETRVARVGDADDNSGTLLMTELQRLMAEEPRARIAGALIITDGRLHDPELVPDMPA PIHALITGLETDWDRRLVIETAPAFGIIGEELLLTIRLEDQGAVPAGLEGRSQIVIAVDGGPPQTYVVPVGESLELPLTL EHAGQNVIQFTVPEAEGELTTRNNAAVVQINGIRDRLRVLLVSGEPHPGQRTWRNLLKSDPSVDLVHFTILRPPDRQDGV PVGELSLIAFPTRELFMEAVDEFDLIIFDRYQRRGILPMVYIDNIRRYVEDGGALLLAAGPDFAGASSLYRTPLSDILPG RPTARVIEEPYVPLISELGARHPVTTGLEGEHTPLPGSDDPWGRWLRQIELTEQGGQTVMEGAGGAPLLMLDRVGQGRVA LLASDHAWLWDRGYEGGGPQLELLRRLAHWMMGEPDLEEEALVADVDGQTITITRRTLADEVGSVIVTTPDGEQLEVMLE ETAPGAFTAQIEGLEQGLYRLVESDLERVIALGPAAPREFEVTIAGAERIDPLLDAEGGRSVRLEDGLPDLRRVSEGRTA HGRGWLGLTTREAYVTTDVTVTPFIQAWVFLLLAAGLMLAGWLREGRQ
Sequences:
>Translated_688_residues MANQILFDPLLDWPLLYGLGAALVLIIALSIWRGLSGWPYRLLAGAALLAALINPSLQTEDREPLSDIVLLVVDESASQR ISDRPSQTADALEALEAEVEALGMETRVARVGDADDNSGTLLMTELQRLMAEEPRARIAGALIITDGRLHDPELVPDMPA PIHALITGLETDWDRRLVIETAPAFGIIGEELLLTIRLEDQGAVPAGLEGRSQIVIAVDGGPPQTYVVPVGESLELPLTL EHAGQNVIQFTVPEAEGELTTRNNAAVVQINGIRDRLRVLLVSGEPHPGQRTWRNLLKSDPSVDLVHFTILRPPDRQDGV PVGELSLIAFPTRELFMEAVDEFDLIIFDRYQRRGILPMVYIDNIRRYVEDGGALLLAAGPDFAGASSLYRTPLSDILPG RPTARVIEEPYVPLISELGARHPVTTGLEGEHTPLPGSDDPWGRWLRQIELTEQGGQTVMEGAGGAPLLMLDRVGQGRVA LLASDHAWLWDRGYEGGGPQLELLRRLAHWMMGEPDLEEEALVADVDGQTITITRRTLADEVGSVIVTTPDGEQLEVMLE ETAPGAFTAQIEGLEQGLYRLVESDLERVIALGPAAPREFEVTIAGAERIDPLLDAEGGRSVRLEDGLPDLRRVSEGRTA HGRGWLGLTTREAYVTTDVTVTPFIQAWVFLLLAAGLMLAGWLREGRQ >Mature_687_residues ANQILFDPLLDWPLLYGLGAALVLIIALSIWRGLSGWPYRLLAGAALLAALINPSLQTEDREPLSDIVLLVVDESASQRI SDRPSQTADALEALEAEVEALGMETRVARVGDADDNSGTLLMTELQRLMAEEPRARIAGALIITDGRLHDPELVPDMPAP IHALITGLETDWDRRLVIETAPAFGIIGEELLLTIRLEDQGAVPAGLEGRSQIVIAVDGGPPQTYVVPVGESLELPLTLE HAGQNVIQFTVPEAEGELTTRNNAAVVQINGIRDRLRVLLVSGEPHPGQRTWRNLLKSDPSVDLVHFTILRPPDRQDGVP VGELSLIAFPTRELFMEAVDEFDLIIFDRYQRRGILPMVYIDNIRRYVEDGGALLLAAGPDFAGASSLYRTPLSDILPGR PTARVIEEPYVPLISELGARHPVTTGLEGEHTPLPGSDDPWGRWLRQIELTEQGGQTVMEGAGGAPLLMLDRVGQGRVAL LASDHAWLWDRGYEGGGPQLELLRRLAHWMMGEPDLEEEALVADVDGQTITITRRTLADEVGSVIVTTPDGEQLEVMLEE TAPGAFTAQIEGLEQGLYRLVESDLERVIALGPAAPREFEVTIAGAERIDPLLDAEGGRSVRLEDGLPDLRRVSEGRTAH GRGWLGLTTREAYVTTDVTVTPFIQAWVFLLLAAGLMLAGWLREGRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75048; Mature: 74916
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANQILFDPLLDWPLLYGLGAALVLIIALSIWRGLSGWPYRLLAGAALLAALINPSLQTE CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC DREPLSDIVLLVVDESASQRISDRPSQTADALEALEAEVEALGMETRVARVGDADDNSGT CCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCE LLMTELQRLMAEEPRARIAGALIITDGRLHDPELVPDMPAPIHALITGLETDWDRRLVIE EHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE TAPAFGIIGEELLLTIRLEDQGAVPAGLEGRSQIVIAVDGGPPQTYVVPVGESLELPLTL ECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEH EHAGQNVIQFTVPEAEGELTTRNNAAVVQINGIRDRLRVLLVSGEPHPGQRTWRNLLKSD HCCCCCEEEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHCC PSVDLVHFTILRPPDRQDGVPVGELSLIAFPTRELFMEAVDEFDLIIFDRYQRRGILPMV CCEEEEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCEEEEECHHHCCCCEEH YIDNIRRYVEDGGALLLAAGPDFAGASSLYRTPLSDILPGRPTARVIEEPYVPLISELGA HHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCHHHHCCCCCCHHHHHCCCHHHHHHCCC RHPVTTGLEGEHTPLPGSDDPWGRWLRQIELTEQGGQTVMEGAGGAPLLMLDRVGQGRVA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCCEE LLASDHAWLWDRGYEGGGPQLELLRRLAHWMMGEPDLEEEALVADVDGQTITITRRTLAD EEECCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEHHHHHH EVGSVIVTTPDGEQLEVMLEETAPGAFTAQIEGLEQGLYRLVESDLERVIALGPAAPREF HHCCEEEECCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE EVTIAGAERIDPLLDAEGGRSVRLEDGLPDLRRVSEGRTAHGRGWLGLTTREAYVTTDVT EEEEECHHHCCHHHCCCCCCEEEECCCCCHHHHHHCCCCCCCCCEEEEECCCEEEEECCE VTPFIQAWVFLLLAAGLMLAGWLREGRQ EHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANQILFDPLLDWPLLYGLGAALVLIIALSIWRGLSGWPYRLLAGAALLAALINPSLQTE CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC DREPLSDIVLLVVDESASQRISDRPSQTADALEALEAEVEALGMETRVARVGDADDNSGT CCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCE LLMTELQRLMAEEPRARIAGALIITDGRLHDPELVPDMPAPIHALITGLETDWDRRLVIE EHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE TAPAFGIIGEELLLTIRLEDQGAVPAGLEGRSQIVIAVDGGPPQTYVVPVGESLELPLTL ECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEH EHAGQNVIQFTVPEAEGELTTRNNAAVVQINGIRDRLRVLLVSGEPHPGQRTWRNLLKSD HCCCCCEEEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHCC PSVDLVHFTILRPPDRQDGVPVGELSLIAFPTRELFMEAVDEFDLIIFDRYQRRGILPMV CCEEEEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCEEEEECHHHCCCCEEH YIDNIRRYVEDGGALLLAAGPDFAGASSLYRTPLSDILPGRPTARVIEEPYVPLISELGA HHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCHHHHCCCCCCHHHHHCCCHHHHHHCCC RHPVTTGLEGEHTPLPGSDDPWGRWLRQIELTEQGGQTVMEGAGGAPLLMLDRVGQGRVA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCCEE LLASDHAWLWDRGYEGGGPQLELLRRLAHWMMGEPDLEEEALVADVDGQTITITRRTLAD EEECCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEHHHHHH EVGSVIVTTPDGEQLEVMLEETAPGAFTAQIEGLEQGLYRLVESDLERVIALGPAAPREF HHCCEEEECCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE EVTIAGAERIDPLLDAEGGRSVRLEDGLPDLRRVSEGRTAHGRGWLGLTTREAYVTTDVT EEEEECHHHCCHHHCCCCCCEEEECCCCCHHHHHHCCCCCCCCCEEEEECCCEEEEECCE VTPFIQAWVFLLLAAGLMLAGWLREGRQ EHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA