| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053175
Identifier: 89053175
GI number: 89053175
Start: 655349
End: 656236
Strand: Direct
Name: 89053175
Synonym: Jann_0684
Alternate gene names: NA
Gene position: 655349-656236 (Clockwise)
Preceding gene: 89053174
Following gene: 89053176
Centisome position: 15.18
GC content: 65.32
Gene sequence:
>888_bases TTGAGCGAGCTTACCCTCCACACACCTGACAGCCTCCGGTCCCGGTCGGAGTCCGTTGCGGCCTCCCTCCCGCCGTTGAT GGCCGATGCGCAGCATCTGGCGGCGACGGTTCTGTTGGGGGTGCATGGCCGCAAACGGGCGGGCACGGGAGATGAGTTCT GGCAATATCGCCCGGCAGAACAGGGCGATAGCTATCGGTCCATCGACTGGCGGCGCTCTGCCCGGTCCGATGGGCACTTC CTGCGCCAGACCGAATGGCAGGCGGCACAATCGGTGATGATCGGTGTCGATGACGCGGCGTCGATGACCTATTCTGGGGC GAAAACCCGCCCATCTAAGCTGCGCCGCGCGCAGACGCTGGCCATGGCGCTGGCGGTCATTGCCGTGCGTGGCGGCGAAC GGGTGGGGCTGACCCATCTGGCGGAGCCGCCCCGGGGCGGGCAGGCGCAATTGCTGCGGATGGCGACCGAATTGATGGAC AGTGTCGACCGCCCCGAATACGGCGCGCCGAAACCACAAGCCATGCCCGCAGGCGCGCGCGCAGTATTTTTCAGCGACTT CCTTGGTGATCCCAAAGCGATTGAGACGGTGCTGGGCCGCGCGGCGGATCGGGGTGTGCAGGGGGCACTGGTGCAGATCC TGGACCCCGATGAAGAGGCGTTTCCCTTCGACGGGCGCACGTTGTTCGAGTCGATGTCCGGCGCGATCCGGTTTGAGACG TTGAAAGCCAAATCCCTGCGCGAAGAATATCTCGCGCGCCTGACCGCCCGCAAAGACGCGTTGCGCGACATGACCAGACG CACGGGGTGGAGCTTCCACGTCCACCACACCGATCAACCCGCTGAACCCGCACTGCTGTGGCTCTATCAAGCGTTGGAGC GTCGGTGA
Upstream 100 bases:
>100_bases ACCGGATGGCGCTGTCGTTTGCGGCCCGCGCCGAGGGGGCTGTGCTGGAGCAGGTGATTGATGAAGTCACGGCCCGTGCG ACCCGGATTGAGGCGGCGGC
Downstream 100 bases:
>100_bases TGTTCAGCGCCCTGGGGTTCGCCACGCCGCTTCTTTTGCTGGCGCTGATTGCCTTGCCGCTGCTGTGGTGGCTGCTGCGT GCCGTGCCGCCCGCACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSELTLHTPDSLRSRSESVAASLPPLMADAQHLAATVLLGVHGRKRAGTGDEFWQYRPAEQGDSYRSIDWRRSARSDGHF LRQTEWQAAQSVMIGVDDAASMTYSGAKTRPSKLRRAQTLAMALAVIAVRGGERVGLTHLAEPPRGGQAQLLRMATELMD SVDRPEYGAPKPQAMPAGARAVFFSDFLGDPKAIETVLGRAADRGVQGALVQILDPDEEAFPFDGRTLFESMSGAIRFET LKAKSLREEYLARLTARKDALRDMTRRTGWSFHVHHTDQPAEPALLWLYQALERR
Sequences:
>Translated_295_residues MSELTLHTPDSLRSRSESVAASLPPLMADAQHLAATVLLGVHGRKRAGTGDEFWQYRPAEQGDSYRSIDWRRSARSDGHF LRQTEWQAAQSVMIGVDDAASMTYSGAKTRPSKLRRAQTLAMALAVIAVRGGERVGLTHLAEPPRGGQAQLLRMATELMD SVDRPEYGAPKPQAMPAGARAVFFSDFLGDPKAIETVLGRAADRGVQGALVQILDPDEEAFPFDGRTLFESMSGAIRFET LKAKSLREEYLARLTARKDALRDMTRRTGWSFHVHHTDQPAEPALLWLYQALERR >Mature_294_residues SELTLHTPDSLRSRSESVAASLPPLMADAQHLAATVLLGVHGRKRAGTGDEFWQYRPAEQGDSYRSIDWRRSARSDGHFL RQTEWQAAQSVMIGVDDAASMTYSGAKTRPSKLRRAQTLAMALAVIAVRGGERVGLTHLAEPPRGGQAQLLRMATELMDS VDRPEYGAPKPQAMPAGARAVFFSDFLGDPKAIETVLGRAADRGVQGALVQILDPDEEAFPFDGRTLFESMSGAIRFETL KAKSLREEYLARLTARKDALRDMTRRTGWSFHVHHTDQPAEPALLWLYQALERR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32668; Mature: 32537
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELTLHTPDSLRSRSESVAASLPPLMADAQHLAATVLLGVHGRKRAGTGDEFWQYRPAE CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC QGDSYRSIDWRRSARSDGHFLRQTEWQAAQSVMIGVDDAASMTYSGAKTRPSKLRRAQTL CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCHHHHHHHHHH AMALAVIAVRGGERVGLTHLAEPPRGGQAQLLRMATELMDSVDRPEYGAPKPQAMPAGAR HHHHHHHHHCCCCEECCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH AVFFSDFLGDPKAIETVLGRAADRGVQGALVQILDPDEEAFPFDGRTLFESMSGAIRFET HHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEHH LKAKSLREEYLARLTARKDALRDMTRRTGWSFHVHHTDQPAEPALLWLYQALERR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SELTLHTPDSLRSRSESVAASLPPLMADAQHLAATVLLGVHGRKRAGTGDEFWQYRPAE CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC QGDSYRSIDWRRSARSDGHFLRQTEWQAAQSVMIGVDDAASMTYSGAKTRPSKLRRAQTL CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCHHHHHHHHHH AMALAVIAVRGGERVGLTHLAEPPRGGQAQLLRMATELMDSVDRPEYGAPKPQAMPAGAR HHHHHHHHHCCCCEECCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH AVFFSDFLGDPKAIETVLGRAADRGVQGALVQILDPDEEAFPFDGRTLFESMSGAIRFET HHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEHH LKAKSLREEYLARLTARKDALRDMTRRTGWSFHVHHTDQPAEPALLWLYQALERR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA