| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053172
Identifier: 89053172
GI number: 89053172
Start: 653156
End: 653614
Strand: Reverse
Name: 89053172
Synonym: Jann_0681
Alternate gene names: NA
Gene position: 653614-653156 (Counterclockwise)
Preceding gene: 89053173
Following gene: 89053171
Centisome position: 15.14
GC content: 62.96
Gene sequence:
>459_bases TTGCCGGACGCGGTTAAACACTACCTTGAACGCTCTGGCGCGCTGCTGGACATCGTCGCGCAACACGCCGACGCGGACCG CCTTCTGAGCGACCGCATAGCGCCTGATATGTTCGACGCGGGGCTCAATCTTGCCATTGCCATCCGATTTGCGGCCCGCG CGCTGTGCCCGCCCGCGCAGATCGCGGTGCCGGAGATACCGGAGAGCTTCACCATGGCGACCCTGCGCCCCTACCATTCC AAGATTACGCGCCACATCGCGCCGATCACCGGGGGCGATCTGATCCACACCGTGACCCATAACGCAGGCAATGCGACGCT GACGCAGGCACCGATGGACTACATCGCCCGCTTTGCCTTGCCCAATCAGATCTTTCATCTGACCGCCACTTATGCGGCGC TCAGAGGGGCGGGTGTGGCCCTTGGCAAGGCGGATTTCGACGGTCTTCACGTCTACTAG
Upstream 100 bases:
>100_bases CGCACGACGTGGATGGCACGGACATGTTCGGGGTCTGGTCGCGCGGTGTGTTCTTTCCAATCATTCCTTTGGCCGAGCTG GACCTGTGATTGACCCCGCT
Downstream 100 bases:
>100_bases GACCCCCGGCTGTAAATTCTTCCAGTCTCCCGACACGCTCCTGACAGAACGGTGTCAGGAGGGGGGTGCTAGACCGTCTT CATCACCAGATGAGACAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPDAVKHYLERSGALLDIVAQHADADRLLSDRIAPDMFDAGLNLAIAIRFAARALCPPAQIAVPEIPESFTMATLRPYHS KITRHIAPITGGDLIHTVTHNAGNATLTQAPMDYIARFALPNQIFHLTATYAALRGAGVALGKADFDGLHVY
Sequences:
>Translated_152_residues MPDAVKHYLERSGALLDIVAQHADADRLLSDRIAPDMFDAGLNLAIAIRFAARALCPPAQIAVPEIPESFTMATLRPYHS KITRHIAPITGGDLIHTVTHNAGNATLTQAPMDYIARFALPNQIFHLTATYAALRGAGVALGKADFDGLHVY >Mature_151_residues PDAVKHYLERSGALLDIVAQHADADRLLSDRIAPDMFDAGLNLAIAIRFAARALCPPAQIAVPEIPESFTMATLRPYHSK ITRHIAPITGGDLIHTVTHNAGNATLTQAPMDYIARFALPNQIFHLTATYAALRGAGVALGKADFDGLHVY
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16381; Mature: 16250
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDAVKHYLERSGALLDIVAQHADADRLLSDRIAPDMFDAGLNLAIAIRFAARALCPPAQ CCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCC IAVPEIPESFTMATLRPYHSKITRHIAPITGGDLIHTVTHNAGNATLTQAPMDYIARFAL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHC PNQIFHLTATYAALRGAGVALGKADFDGLHVY CHHHHHHHHHHHHHHCCCEEECCCCCCCEECC >Mature Secondary Structure PDAVKHYLERSGALLDIVAQHADADRLLSDRIAPDMFDAGLNLAIAIRFAARALCPPAQ CHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCC IAVPEIPESFTMATLRPYHSKITRHIAPITGGDLIHTVTHNAGNATLTQAPMDYIARFAL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHC PNQIFHLTATYAALRGAGVALGKADFDGLHVY CHHHHHHHHHHHHHHCCCEEECCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA