Click here to switch to the map view.

The map label for this gene is 89053165

Identifier: 89053165

GI number: 89053165

Start: 646103

End: 646534

Strand: Direct

Name: 89053165

Synonym: Jann_0674

Alternate gene names: NA

Gene position: 646103-646534 (Clockwise)

Preceding gene: 89053164

Following gene: 89053166

Centisome position: 14.96

GC content: 61.11

Gene sequence:

>432_bases
ATGCAGCCGCGCCCCGACAGCGCTTTTGTCCACGACGTCCGCGTCACATGGGGCGACTGTGACCCGGCCAAGATCGCCTA
TACGGGCCACCTGCCTCGGTTCGCGCTTGAGGCCATAGATGCGTGGTGGTCTGAATATCACGGGCCCGGCGGTTGGTATC
ATCTGGAATTGGACACCAATGTCGGCACGCCCTTCGTGCGGCTGGAAATGGACTTCAAATCCCCCGTCACGCCCCGCCAT
ATCCTGAAGTGCCACACCTGGCCGACCAGGTTGGGCACCAAGTCGATCACCTTTCGTGTCGACGGTGTCCAGGACGGTGT
GACCTGCTTTGTAGGCGCGTTCACGTGTGTCTTCACCATCGCCGATCAATTCAAATCCCAGCCCGCGCCGGACCATCTGC
GCGCGTTGATCGAACCCCATATTCCGGCCTGA

Upstream 100 bases:

>100_bases
AGCGCTGTGTGCATGACGCGTCGTCGCCGGAGATGCCCGAAGATCTGGGGATCCCCTGGGCCCATGACGTGCTGGCGCAA
TGCAAGGCGCAGGCCGCCTG

Downstream 100 bases:

>100_bases
CACATGTCCAGCGAAGACCGCCATCCCCCCGTTGCCATTGATGCCGCCATCCTGGCGCTTCAGGCCCGTGTCGGGGACCG
GGTCCGGGCGGCGCGGGCGT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase Superfamily; Thioesterase

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQPRPDSAFVHDVRVTWGDCDPAKIAYTGHLPRFALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEMDFKSPVTPRH
ILKCHTWPTRLGTKSITFRVDGVQDGVTCFVGAFTCVFTIADQFKSQPAPDHLRALIEPHIPA

Sequences:

>Translated_143_residues
MQPRPDSAFVHDVRVTWGDCDPAKIAYTGHLPRFALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEMDFKSPVTPRH
ILKCHTWPTRLGTKSITFRVDGVQDGVTCFVGAFTCVFTIADQFKSQPAPDHLRALIEPHIPA
>Mature_143_residues
MQPRPDSAFVHDVRVTWGDCDPAKIAYTGHLPRFALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEMDFKSPVTPRH
ILKCHTWPTRLGTKSITFRVDGVQDGVTCFVGAFTCVFTIADQFKSQPAPDHLRALIEPHIPA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16128; Mature: 16128

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRPDSAFVHDVRVTWGDCDPAKIAYTGHLPRFALEAIDAWWSEYHGPGGWYHLELDTN
CCCCCCCCEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
VGTPFVRLEMDFKSPVTPRHILKCHTWPTRLGTKSITFRVDGVQDGVTCFVGAFTCVFTI
CCCCEEEEEECCCCCCCHHHEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
ADQFKSQPAPDHLRALIEPHIPA
HHHHCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MQPRPDSAFVHDVRVTWGDCDPAKIAYTGHLPRFALEAIDAWWSEYHGPGGWYHLELDTN
CCCCCCCCEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
VGTPFVRLEMDFKSPVTPRHILKCHTWPTRLGTKSITFRVDGVQDGVTCFVGAFTCVFTI
CCCCEEEEEECCCCCCCHHHEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
ADQFKSQPAPDHLRALIEPHIPA
HHHHCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA