| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89053122
Identifier: 89053122
GI number: 89053122
Start: 604332
End: 604838
Strand: Reverse
Name: 89053122
Synonym: Jann_0631
Alternate gene names: NA
Gene position: 604838-604332 (Counterclockwise)
Preceding gene: 89053123
Following gene: 89053113
Centisome position: 14.01
GC content: 65.88
Gene sequence:
>507_bases ATGAGCCGGACCCTGATTCTGATCCGCCATTGCAAGTCGGACTGGACAACCGACGCGCCCACCGATCATGATCGTGTCCT CAATCCGCGCGGCCGCCGCGATGCCCCCCGCATCGGCGCATGGCTGGCGGCGCGTGATCTGATACCCGACACGGTGCTAT GCTCGGATGCGCAACGAACGCAGGAAACCTGGGAGAGGATTGCCACCCGTCTGCCCTCCCAACCGCCGGTCAGCCTCAGC CACGCGCTTTATCTGGCAGAGCCCGCCGCCATGCTGCACGCGATCCGCAAGGCCGCGGGCAAGACCGTCGCCCTTGTCGG CCATTGTCCCGGAATTTTGACACTGGCCTGGGATCTGGCGGCAATGCCCGTGGCCGATCCCGATTTCGGTGCCTATCCGA CCGGCGCAGTGACGGTGTTTGACTTTGACGACGCCACCTGGGGCGCGGTCGAGCAGGGTGAAATTCGCGCCTTCGTCACC CCCCGAAGCCTGCCCGACCCGGCCTGA
Upstream 100 bases:
>100_bases GTCTGGAGAATGGCTGCAAAGCCCGCCGCGCCTGCCCTGTCAGCCAGAGCTTTGATCGCGACCCGGCCCAATCGGCCTAC CATATGGGACAGTTCCACAA
Downstream 100 bases:
>100_bases GAAAAGGGTCCCAGGTGAACGTCCGGGGGGGTCGAGGGCCGGCTGTGTCCCGATTTTCGTCCTCCCAGCACCATGCTCCG GGCCGCAAGAGCTGTCGTAA
Product: putative phosphohistidine phosphatase SixA
Products: NA
Alternate protein names: Phosphohistidine Phosphatase; Phosphoglycerate Mutase Family Protein; Phosphoglycerate Mutase; Phosphoglycerate/Bisphosphoglycerate Mutase; Phosphohistidine Phosphatase Protein; Phosphohistidine Phosphatase Sixa; Phosphatase; Phosphoglycerate Mutase Family Domain Protein; Regulatory Protein; Phosphoglycerate Mutase Domain-Containing Protein
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSRTLILIRHCKSDWTTDAPTDHDRVLNPRGRRDAPRIGAWLAARDLIPDTVLCSDAQRTQETWERIATRLPSQPPVSLS HALYLAEPAAMLHAIRKAAGKTVALVGHCPGILTLAWDLAAMPVADPDFGAYPTGAVTVFDFDDATWGAVEQGEIRAFVT PRSLPDPA
Sequences:
>Translated_168_residues MSRTLILIRHCKSDWTTDAPTDHDRVLNPRGRRDAPRIGAWLAARDLIPDTVLCSDAQRTQETWERIATRLPSQPPVSLS HALYLAEPAAMLHAIRKAAGKTVALVGHCPGILTLAWDLAAMPVADPDFGAYPTGAVTVFDFDDATWGAVEQGEIRAFVT PRSLPDPA >Mature_167_residues SRTLILIRHCKSDWTTDAPTDHDRVLNPRGRRDAPRIGAWLAARDLIPDTVLCSDAQRTQETWERIATRLPSQPPVSLSH ALYLAEPAAMLHAIRKAAGKTVALVGHCPGILTLAWDLAAMPVADPDFGAYPTGAVTVFDFDDATWGAVEQGEIRAFVTP RSLPDPA
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18302; Mature: 18171
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTLILIRHCKSDWTTDAPTDHDRVLNPRGRRDAPRIGAWLAARDLIPDTVLCSDAQRT CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCHHH QETWERIATRLPSQPPVSLSHALYLAEPAAMLHAIRKAAGKTVALVGHCPGILTLAWDLA HHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH AMPVADPDFGAYPTGAVTVFDFDDATWGAVEQGEIRAFVTPRSLPDPA HCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure SRTLILIRHCKSDWTTDAPTDHDRVLNPRGRRDAPRIGAWLAARDLIPDTVLCSDAQRT CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCHHH QETWERIATRLPSQPPVSLSHALYLAEPAAMLHAIRKAAGKTVALVGHCPGILTLAWDLA HHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH AMPVADPDFGAYPTGAVTVFDFDDATWGAVEQGEIRAFVTPRSLPDPA HCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA