Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053101

Identifier: 89053101

GI number: 89053101

Start: 585736

End: 586236

Strand: Direct

Name: 89053101

Synonym: Jann_0610

Alternate gene names: NA

Gene position: 585736-586236 (Clockwise)

Preceding gene: 89053100

Following gene: 89053102

Centisome position: 13.57

GC content: 60.08

Gene sequence:

>501_bases
GTGCACTATAGTTCCACCCTGCCCATTCCGCGATTCGCAATTTGGACGTCTGCCGTGCCTATCGAATTTTCTACCTGTCT
TGAGCACGACCTTGTCTACGCGCGCTGGTTTGGAGCTGTTGATTTTGACCAGTTCGGCGCGAATTTCGTAAGGTATGTGG
GCGACGCGCATTACCGCCCCGGGCGTCCTGAATTGATTGACCATTCCGAGATCACCACCTTCGAGGGCGACCCGAACCTG
TTGCGGACGATGCTGCGGCAGGTGAACGCCCAAAGCCCCGCACTGGTCGTGGAAACCCACACCGTCATCTACTCGCCACA
AGACACGCTGTTCGGTCTGGGGCGGATGTACCAAATCCTTGCGGAGCTGGCGGAGGGGATCCGGGTGGAGGTGTTCCAGG
ATGAGCGGGAGGCTCTTGCGGCGCTTGGGCTGGGGCATGACAGCATCGCGGATCTGCTGGCGCAGGAAACGTTCCTGCCT
GCTACTCCGCGCGGTGGCTGA

Upstream 100 bases:

>100_bases
AAGAGCGCGGCTGAAGTCAGCCTCTCTTTATTCAATGCTGAAAGGCCCTGGTCCCGGTGGATCGGGGCCTTTTTGATTTT
GACGAAGCGCTGCGGGAAAG

Downstream 100 bases:

>100_bases
GGCTACGCAAGCGCGCTTGATTACGGGGTGCGCCAACGCCGTCTGTCCGACTGTGCCCCACAGGTTGTATGACAGCCGCC
GTCCGCTCCGCGCAAACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MHYSSTLPIPRFAIWTSAVPIEFSTCLEHDLVYARWFGAVDFDQFGANFVRYVGDAHYRPGRPELIDHSEITTFEGDPNL
LRTMLRQVNAQSPALVVETHTVIYSPQDTLFGLGRMYQILAELAEGIRVEVFQDEREALAALGLGHDSIADLLAQETFLP
ATPRGG

Sequences:

>Translated_166_residues
MHYSSTLPIPRFAIWTSAVPIEFSTCLEHDLVYARWFGAVDFDQFGANFVRYVGDAHYRPGRPELIDHSEITTFEGDPNL
LRTMLRQVNAQSPALVVETHTVIYSPQDTLFGLGRMYQILAELAEGIRVEVFQDEREALAALGLGHDSIADLLAQETFLP
ATPRGG
>Mature_166_residues
MHYSSTLPIPRFAIWTSAVPIEFSTCLEHDLVYARWFGAVDFDQFGANFVRYVGDAHYRPGRPELIDHSEITTFEGDPNL
LRTMLRQVNAQSPALVVETHTVIYSPQDTLFGLGRMYQILAELAEGIRVEVFQDEREALAALGLGHDSIADLLAQETFLP
ATPRGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18566; Mature: 18566

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYSSTLPIPRFAIWTSAVPIEFSTCLEHDLVYARWFGAVDFDQFGANFVRYVGDAHYRP
CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
GRPELIDHSEITTFEGDPNLLRTMLRQVNAQSPALVVETHTVIYSPQDTLFGLGRMYQIL
CCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHH
AELAEGIRVEVFQDEREALAALGLGHDSIADLLAQETFLPATPRGG
HHHHCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHYSSTLPIPRFAIWTSAVPIEFSTCLEHDLVYARWFGAVDFDQFGANFVRYVGDAHYRP
CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
GRPELIDHSEITTFEGDPNLLRTMLRQVNAQSPALVVETHTVIYSPQDTLFGLGRMYQIL
CCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHH
AELAEGIRVEVFQDEREALAALGLGHDSIADLLAQETFLPATPRGG
HHHHCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA