| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053050
Identifier: 89053050
GI number: 89053050
Start: 547082
End: 547273
Strand: Direct
Name: 89053050
Synonym: Jann_0559
Alternate gene names: NA
Gene position: 547082-547273 (Clockwise)
Preceding gene: 89053047
Following gene: 89053051
Centisome position: 12.67
GC content: 57.29
Gene sequence:
>192_bases ATGACCAATCCGTTCCAGTTTCTGCAGCAGACCCGCGCTGAAGTGGCGAAGGTTGTCTGGCCGACGCGCAAAGAGGTGAT CACCACCACGGCGATGGTGTTCCTGCTGGCGCTTGTGGCCGCGATCTTCTTTTTCGGCGTTGACTGGCTGATCCGCAATG CGCTTGAGCTGTTGCTGACCTCTTTCGGATAA
Upstream 100 bases:
>100_bases TTGCATGCGCGCGCGGCCATGCGTATATGCCAGTCTGACCCAAAGAAGTGCCAGATTGCGCAAATGAAGCGCAAGTCTAA GCAATAGAAGTGACTGTGCC
Downstream 100 bases:
>100_bases GCGTTTCGCTTCTGGGCTTGATTTCCGTCGGCCCGGGGGGTACTTCGCCTCCATCCCCAAAACCTGAAGCATCCGACAGC GCGCACCGCTGGGATGTGGT
Product: protein translocase subunit secE/sec61 gamma
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MTNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLTSFG
Sequences:
>Translated_63_residues MTNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLTSFG >Mature_62_residues TNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLTSFG
Specific function: Unknown
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7176; Mature: 7044
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLT CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFG HCC >Mature Secondary Structure TNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLT CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFG HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA