Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053050

Identifier: 89053050

GI number: 89053050

Start: 547082

End: 547273

Strand: Direct

Name: 89053050

Synonym: Jann_0559

Alternate gene names: NA

Gene position: 547082-547273 (Clockwise)

Preceding gene: 89053047

Following gene: 89053051

Centisome position: 12.67

GC content: 57.29

Gene sequence:

>192_bases
ATGACCAATCCGTTCCAGTTTCTGCAGCAGACCCGCGCTGAAGTGGCGAAGGTTGTCTGGCCGACGCGCAAAGAGGTGAT
CACCACCACGGCGATGGTGTTCCTGCTGGCGCTTGTGGCCGCGATCTTCTTTTTCGGCGTTGACTGGCTGATCCGCAATG
CGCTTGAGCTGTTGCTGACCTCTTTCGGATAA

Upstream 100 bases:

>100_bases
TTGCATGCGCGCGCGGCCATGCGTATATGCCAGTCTGACCCAAAGAAGTGCCAGATTGCGCAAATGAAGCGCAAGTCTAA
GCAATAGAAGTGACTGTGCC

Downstream 100 bases:

>100_bases
GCGTTTCGCTTCTGGGCTTGATTTCCGTCGGCCCGGGGGGTACTTCGCCTCCATCCCCAAAACCTGAAGCATCCGACAGC
GCGCACCGCTGGGATGTGGT

Product: protein translocase subunit secE/sec61 gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MTNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLTSFG

Sequences:

>Translated_63_residues
MTNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLTSFG
>Mature_62_residues
TNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLTSFG

Specific function: Unknown

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7176; Mature: 7044

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLT
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFG
HCC
>Mature Secondary Structure 
TNPFQFLQQTRAEVAKVVWPTRKEVITTTAMVFLLALVAAIFFFGVDWLIRNALELLLT
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFG
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA