| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052995
Identifier: 89052995
GI number: 89052995
Start: 500571
End: 501026
Strand: Reverse
Name: 89052995
Synonym: Jann_0504
Alternate gene names: NA
Gene position: 501026-500571 (Counterclockwise)
Preceding gene: 89052996
Following gene: 89052994
Centisome position: 11.6
GC content: 62.28
Gene sequence:
>456_bases ATGATCCGCATCCCCTCGTCCGCTCTTCTCCTCGGTCTTGCAGGCCTGATCCCGTTCCTATGGGGCGCCTCGTCGTCGGC CAGCCTCCTGTTGGATTACATGCCCGTCTCCCTCCCCGCCGCTTTTACGGGTGCGTCGATCCTGACCGCCTATGGCACGA TCATCCTCAGCTTCATGGCGGGCGTCATCTGGGGGTTCGCGGCCAAGGCCGGAGGACCGTGGATGCCCTTGGGTCTTGCC CTCTCCACCGTCCCCGCGCTCTGGATCTTCTTCTTCACTGGTCAGCCACATAGCACGCAACTCGTCGTCTTGGGTGCTGG TTTCATCGGCCTTCTTGCCCTTGATGTCGCCTGTGTTCGCAAGGGCCTCGCGCCCGGCTGGTGGTTGGCGCTGCGCCTTT TGCTGACCGGAGTGGTTGTCTTTTGCCTCCTCATCGGGTTCCTACTGATCCCATGA
Upstream 100 bases:
>100_bases GGCAAGGGGCAGCGCCCCCGTTGGGGTGGGAGGGCGGGCCCTCCCACCCCCCAAAAAAACCCCCCTTGCCAGTACATCTG ACCGCGCCACATAGCCCCCC
Downstream 100 bases:
>100_bases GTGATGATCAGACCCTCTCCGTCTATGGCGATGCCGTGGACCGCTACACGGCGACCCCGATGGAACCCGAGCATATCGCC GCGCTGGACCATTTCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MIRIPSSALLLGLAGLIPFLWGASSSASLLLDYMPVSLPAAFTGASILTAYGTIILSFMAGVIWGFAAKAGGPWMPLGLA LSTVPALWIFFFTGQPHSTQLVVLGAGFIGLLALDVACVRKGLAPGWWLALRLLLTGVVVFCLLIGFLLIP
Sequences:
>Translated_151_residues MIRIPSSALLLGLAGLIPFLWGASSSASLLLDYMPVSLPAAFTGASILTAYGTIILSFMAGVIWGFAAKAGGPWMPLGLA LSTVPALWIFFFTGQPHSTQLVVLGAGFIGLLALDVACVRKGLAPGWWLALRLLLTGVVVFCLLIGFLLIP >Mature_151_residues MIRIPSSALLLGLAGLIPFLWGASSSASLLLDYMPVSLPAAFTGASILTAYGTIILSFMAGVIWGFAAKAGGPWMPLGLA LSTVPALWIFFFTGQPHSTQLVVLGAGFIGLLALDVACVRKGLAPGWWLALRLLLTGVVVFCLLIGFLLIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15771; Mature: 15771
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIPSSALLLGLAGLIPFLWGASSSASLLLDYMPVSLPAAFTGASILTAYGTIILSFMA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GVIWGFAAKAGGPWMPLGLALSTVPALWIFFFTGQPHSTQLVVLGAGFIGLLALDVACVR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHH KGLAPGWWLALRLLLTGVVVFCLLIGFLLIP HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRIPSSALLLGLAGLIPFLWGASSSASLLLDYMPVSLPAAFTGASILTAYGTIILSFMA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GVIWGFAAKAGGPWMPLGLALSTVPALWIFFFTGQPHSTQLVVLGAGFIGLLALDVACVR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHH KGLAPGWWLALRLLLTGVVVFCLLIGFLLIP HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA