Click here to switch to the map view.

The map label for this gene is 89052992

Identifier: 89052992

GI number: 89052992

Start: 499133

End: 499522

Strand: Reverse

Name: 89052992

Synonym: Jann_0501

Alternate gene names: NA

Gene position: 499522-499133 (Counterclockwise)

Preceding gene: 89052993

Following gene: 89052991

Centisome position: 11.57

GC content: 64.36

Gene sequence:

>390_bases
ATGGATAAGGTCTGTCCGGTGGTCCTGCGCCCGGGGCGGAGAGTTCTGGCGTTCAGGCATCCCCAGGCAGGACTTCAACT
GGTGAAGGGCGGCATCGAGTCCAATGAAGCGCCCGCCGCAGCGGCTGCGCGGGAACTGTATGAAGAGGCTGGCCTGTCCC
TGTGGCCGGTGCGCGACCTGGGCCACAGCACCCGTATCGCGCGTGGCGACACCTGGCATTTCTGGCTCATGGCTCACAGC
ATCCTGCCCGAGGCCTGGGACCATCACACAGACGACGATGGCGGGCATCGCTTTGCCTTCTTCTGGCACCCTATCGGTGA
GCCTCCTCCCCCGGATTTCGCGCCGCCCTTTGTCCGTGCGCTTGATCACATTGCCGCAACCATCCCATGA

Upstream 100 bases:

>100_bases
GAATGGATCAAGGGTCACGCGGGCCATGAGGGCAATGAGAAGGCAGATGAACTTGCCCGCGCAGGCATGGCGCCCTTCAA
GACGGGCAAGCGGGGCAAAG

Downstream 100 bases:

>100_bases
CCGTTGCCCTCTCGCTCGACTATGCCGCGGTCCTGATCTTCGCTCTGACCGGGGCGCTCGCGGCCTCCCGCGCGCAGCTC
GATATCGTGGGTTTCATCTT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NUDIX Family Hydrolase; NUDIX Hydrolase

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDKVCPVVLRPGRRVLAFRHPQAGLQLVKGGIESNEAPAAAAARELYEEAGLSLWPVRDLGHSTRIARGDTWHFWLMAHS
ILPEAWDHHTDDDGGHRFAFFWHPIGEPPPPDFAPPFVRALDHIAATIP

Sequences:

>Translated_129_residues
MDKVCPVVLRPGRRVLAFRHPQAGLQLVKGGIESNEAPAAAAARELYEEAGLSLWPVRDLGHSTRIARGDTWHFWLMAHS
ILPEAWDHHTDDDGGHRFAFFWHPIGEPPPPDFAPPFVRALDHIAATIP
>Mature_129_residues
MDKVCPVVLRPGRRVLAFRHPQAGLQLVKGGIESNEAPAAAAARELYEEAGLSLWPVRDLGHSTRIARGDTWHFWLMAHS
ILPEAWDHHTDDDGGHRFAFFWHPIGEPPPPDFAPPFVRALDHIAATIP

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14379; Mature: 14379

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVCPVVLRPGRRVLAFRHPQAGLQLVKGGIESNEAPAAAAARELYEEAGLSLWPVRDL
CCCCCCEEECCCCEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECHHHC
GHSTRIARGDTWHFWLMAHSILPEAWDHHTDDDGGHRFAFFWHPIGEPPPPDFAPPFVRA
CCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHH
LDHIAATIP
HHHHHHCCC
>Mature Secondary Structure
MDKVCPVVLRPGRRVLAFRHPQAGLQLVKGGIESNEAPAAAAARELYEEAGLSLWPVRDL
CCCCCCEEECCCCEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECHHHC
GHSTRIARGDTWHFWLMAHSILPEAWDHHTDDDGGHRFAFFWHPIGEPPPPDFAPPFVRA
CCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHH
LDHIAATIP
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA