| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052979
Identifier: 89052979
GI number: 89052979
Start: 487641
End: 487862
Strand: Direct
Name: 89052979
Synonym: Jann_0488
Alternate gene names: NA
Gene position: 487641-487862 (Clockwise)
Preceding gene: 89052977
Following gene: 89052980
Centisome position: 11.29
GC content: 59.46
Gene sequence:
>222_bases ATGCTTGAAATTCTGCGCAGCAACGATCCCACAATTATCGCCTTCGCCACGGCCTTGCTCAGGGGCGAGGATATAGAGGT CTTCGAGATGGACGTCCATATGAGCGGCCTTGAAGGCAGCATTGGCATATTGCCGCGCCGCCTTCTGGTGCGCCGCGCTG AGGCCGCTGCCGCGGAGGTCGTTCTGCGCGATAATGAGCTTCCGGTGTCGGAGTGGAACTGA
Upstream 100 bases:
>100_bases GCAGCGCTCAGGCGGTCGTGGGGCTTCTGCGTTGGCGTGTCCAAACTCATATCCCTATCCCCATCTCGACATGTTGCGCA GGCGTGATTACCTGTCAGTT
Downstream 100 bases:
>100_bases CCGACACGTTTGGTGATGCGGTCACGCAAGATGGCTTCTTGAACGGCCGCGTCATGGCGTGGCAGCCGCGCAAGGGCTAC CGTGCGGCGACGGATCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MLEILRSNDPTIIAFATALLRGEDIEVFEMDVHMSGLEGSIGILPRRLLVRRAEAAAAEVVLRDNELPVSEWN
Sequences:
>Translated_73_residues MLEILRSNDPTIIAFATALLRGEDIEVFEMDVHMSGLEGSIGILPRRLLVRRAEAAAAEVVLRDNELPVSEWN >Mature_73_residues MLEILRSNDPTIIAFATALLRGEDIEVFEMDVHMSGLEGSIGILPRRLLVRRAEAAAAEVVLRDNELPVSEWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8132; Mature: 8132
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEILRSNDPTIIAFATALLRGEDIEVFEMDVHMSGLEGSIGILPRRLLVRRAEAAAAEV CCEEECCCCCEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCHHEEE VLRDNELPVSEWN EEECCCCCCCCCC >Mature Secondary Structure MLEILRSNDPTIIAFATALLRGEDIEVFEMDVHMSGLEGSIGILPRRLLVRRAEAAAAEV CCEEECCCCCEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCHHEEE VLRDNELPVSEWN EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA