Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052961

Identifier: 89052961

GI number: 89052961

Start: 468447

End: 468731

Strand: Direct

Name: 89052961

Synonym: Jann_0470

Alternate gene names: NA

Gene position: 468447-468731 (Clockwise)

Preceding gene: 89052960

Following gene: 89052962

Centisome position: 10.85

GC content: 59.3

Gene sequence:

>285_bases
ATGGTTCTGTTTTCCTTTTTCGGATCCCTGATGATCGCAGGCATCGTGGCTTTTCTGTTCGAGAAATGGGACTTCACGCA
TAACGGCATCCTGCCCTCTGTTTTCATCGCCTGGGGGGCTGTGCTGGTGCTGTTCTTCGTGCGGTCGTTGTTTGGCCTGA
CGCTTGGGTCACCGGGCCTGGATGCCGTGATCGGCTCTGCCGCCGCGCTGATCCTGATCCCCACCGAGTACGCTTCGAAA
CGGCGGGGCAAGGATTCCAGCGACCGGCCTTGGCGGAACCGGTAA

Upstream 100 bases:

>100_bases
TCTTGGGTGCGCGGATCGCGCCGGGGACGGTTTTGGAGTAAGATGGGCTGCGGCCCGACGTTCAATTGGGGCTGAACACC
CCGGGCAATCGGAGGACCCC

Downstream 100 bases:

>100_bases
TCCGAGTGCCGCAGTGCAGCACTTGCACAGGCTTGCGCAATAACCTACCCCTCACGCAAAGCACTGCGCAATTTCCTTTC
TTGAGGTCCCCATGAGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MVLFSFFGSLMIAGIVAFLFEKWDFTHNGILPSVFIAWGAVLVLFFVRSLFGLTLGSPGLDAVIGSAAALILIPTEYASK
RRGKDSSDRPWRNR

Sequences:

>Translated_94_residues
MVLFSFFGSLMIAGIVAFLFEKWDFTHNGILPSVFIAWGAVLVLFFVRSLFGLTLGSPGLDAVIGSAAALILIPTEYASK
RRGKDSSDRPWRNR
>Mature_94_residues
MVLFSFFGSLMIAGIVAFLFEKWDFTHNGILPSVFIAWGAVLVLFFVRSLFGLTLGSPGLDAVIGSAAALILIPTEYASK
RRGKDSSDRPWRNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10352; Mature: 10352

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLFSFFGSLMIAGIVAFLFEKWDFTHNGILPSVFIAWGAVLVLFFVRSLFGLTLGSPGL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DAVIGSAAALILIPTEYASKRRGKDSSDRPWRNR
HHHHHHHHHEEEECCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVLFSFFGSLMIAGIVAFLFEKWDFTHNGILPSVFIAWGAVLVLFFVRSLFGLTLGSPGL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DAVIGSAAALILIPTEYASKRRGKDSSDRPWRNR
HHHHHHHHHEEEECCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA