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The map label for this gene is bkdR [H]

Identifier: 89052950

GI number: 89052950

Start: 460789

End: 461271

Strand: Direct

Name: bkdR [H]

Synonym: Jann_0459

Alternate gene names: 89052950

Gene position: 460789-461271 (Clockwise)

Preceding gene: 89052948

Following gene: 89052953

Centisome position: 10.67

GC content: 60.66

Gene sequence:

>483_bases
ATGACGCGAGAAATCACCAAAGAGGTGGAGTTGGACGCGATGGATGTCGCGATCCTGCAGGCATTGCAGCGGCAGGGCCG
AATAACCCATGCGGATCTGTCGGAGAAGGTGAATCTGTCGCCCTCGGCCTGCCACAGACGGGTTCAGCGGCTGGAGGCGT
CTGGCGTAATCCGCGACTACGTAGCGTTGGTGAGCCCGCGTGCGGTAGGGCGGGTGACAACGGTGTTTGTGGAGATCAAA
TTGCAGGGTCAATCCGATGAGACGTTCGATGCGTTCGAGAAGGCGGTGGCCCGTGTGCCGGATGTGTTGGAGTGTCACCT
GATGGCGGGCTCCGCCGACTACCTCCTGAAGGTTGTCGCGCGCGATTCTGAGGATTTTGCGCGCATCCATCGCCAGCATT
TGGCGCGGCTCCCCGGTGTGGCGCAGTTGCAGTCGAGCTTTGCGTTGAAGACGGTGTTCAAGACGACCGCTTTGCCCGTG
TAG

Upstream 100 bases:

>100_bases
AACCATCTGAGCGGAAAATACGCCCGGCCACGTGGAATTGCTTTGAAACGTCGCGCGCGTGTGAGCGATAACACGCAAGA
TTTTTGTGTAGAGGTGAGCA

Downstream 100 bases:

>100_bases
GGCTCAGACCGGTTTAAAAGACGGCGCGGACGATCAGAAACGACACCATGCCTGCGACAACAGCCCAGATCGGGCTTTTG
CGCCAGTAACCGACGCTCAT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTREITKEVELDAMDVAILQALQRQGRITHADLSEKVNLSPSACHRRVQRLEASGVIRDYVALVSPRAVGRVTTVFVEIK
LQGQSDETFDAFEKAVARVPDVLECHLMAGSADYLLKVVARDSEDFARIHRQHLARLPGVAQLQSSFALKTVFKTTALPV

Sequences:

>Translated_160_residues
MTREITKEVELDAMDVAILQALQRQGRITHADLSEKVNLSPSACHRRVQRLEASGVIRDYVALVSPRAVGRVTTVFVEIK
LQGQSDETFDAFEKAVARVPDVLECHLMAGSADYLLKVVARDSEDFARIHRQHLARLPGVAQLQSSFALKTVFKTTALPV
>Mature_159_residues
TREITKEVELDAMDVAILQALQRQGRITHADLSEKVNLSPSACHRRVQRLEASGVIRDYVALVSPRAVGRVTTVFVEIKL
QGQSDETFDAFEKAVARVPDVLECHLMAGSADYLLKVVARDSEDFARIHRQHLARLPGVAQLQSSFALKTVFKTTALPV

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=38.255033557047, Blast_Score=113, Evalue=6e-27,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=35.3333333333333, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17752; Mature: 17620

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTREITKEVELDAMDVAILQALQRQGRITHADLSEKVNLSPSACHRRVQRLEASGVIRDY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
VALVSPRAVGRVTTVFVEIKLQGQSDETFDAFEKAVARVPDVLECHLMAGSADYLLKVVA
HHHHCCCHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
RDSEDFARIHRQHLARLPGVAQLQSSFALKTVFKTTALPV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TREITKEVELDAMDVAILQALQRQGRITHADLSEKVNLSPSACHRRVQRLEASGVIRDY
CCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
VALVSPRAVGRVTTVFVEIKLQGQSDETFDAFEKAVARVPDVLECHLMAGSADYLLKVVA
HHHHCCCHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
RDSEDFARIHRQHLARLPGVAQLQSSFALKTVFKTTALPV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]