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The map label for this gene is 89052922

Identifier: 89052922

GI number: 89052922

Start: 435623

End: 436510

Strand: Reverse

Name: 89052922

Synonym: Jann_0431

Alternate gene names: NA

Gene position: 436510-435623 (Counterclockwise)

Preceding gene: 89052930

Following gene: 89052921

Centisome position: 10.11

GC content: 63.18

Gene sequence:

>888_bases
GTGAACCTTGCCCTGACAGTGCTGGACATCACCGCACCGGTGTTCATTCTTGGTGCGGCTGGCTTCATCTGGGTGCGTGC
GGGATATGAGTATCCGACAGCCTTCGTCACCCGCCTGGCCATGACGCTTGCCGTGCCGTGCCTGATCTTCACGACGCTTG
TCGCCGCCGATATCGAACCGCGGGCCCTGGCGCAGCTCAGCATGGCGGCAATCCTCTGCTACGGGCTGATCACCTTGGGA
GCCTGGGTTGTCGTGCGAATGTTCCGCCTCGATACCCGCGCCTATCTGGCCCCTTTGACGTTCGGGAATACCGGAAATCT
GGGCCTTCCGCTCGCGCTTTTTGCCTTTGGCGAAACGGGCCTTGGACTGGCGGTCGTGATCTTCGCGGTTATGGCCATCA
TCATGTTCACCGTCGGCCTCTGGATGGTCGCGGGTGTGCAGAACCCTCTGCGCGTGCTGCGGGAACCGATCCTCTGGGCC
TCCGTCCTCGGCGTTCTGTTCCTTTCCGCCGGGTGGACGCCTCCTAACGTTGCGCTGAATTCCCTCACTCTGATCGGGCA
CATGGGCATCCCGCTGATGCTGCTGACCCTCGGTGCCGCCGTTGCTCGGCTGAAACCCGCTCGCGTCCTGCCCGCCTTCG
GGCTCTCGGCGATCAAATTGTCCATCGGGTTGCTGGTGGGCATTGGCGTCGGCCTCGCGTTTGGGCTGTCTGGCGCGCCC
CTGGCCGTTCTGATCCTGCAAATGGCCACTCCTGTGGGCGTCACCTCCTATCTCATGGCCGAGCGGTACAAAACCGATCC
CGACGCCGCCGCCAGCCTTGTCGTGACCTCCACCCTTCTGGCGATTGTGGCCCTTCCGATCACGCTTTCGTTCCTTCTGC
CCGGGTGA

Upstream 100 bases:

>100_bases
CGTCTCAAGCATTGCACATCCCCAGAGTATCAATCGTCTAGTTATCGAACCGCCCCCATGGTTGTCCATCCCGACCCGTG
ATTCTTATGGGAAACAGTCT

Downstream 100 bases:

>100_bases
GGTAAACCAGCAGTTTTCCTGGCATCAGAATTGCGCTATATTCCCCCGATAACGCTCCGAAAAACGGGGCACCCCCATAG
GCAGAGCAGGCCAATGTATA

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNLALTVLDITAPVFILGAAGFIWVRAGYEYPTAFVTRLAMTLAVPCLIFTTLVAADIEPRALAQLSMAAILCYGLITLG
AWVVVRMFRLDTRAYLAPLTFGNTGNLGLPLALFAFGETGLGLAVVIFAVMAIIMFTVGLWMVAGVQNPLRVLREPILWA
SVLGVLFLSAGWTPPNVALNSLTLIGHMGIPLMLLTLGAAVARLKPARVLPAFGLSAIKLSIGLLVGIGVGLAFGLSGAP
LAVLILQMATPVGVTSYLMAERYKTDPDAAASLVVTSTLLAIVALPITLSFLLPG

Sequences:

>Translated_295_residues
MNLALTVLDITAPVFILGAAGFIWVRAGYEYPTAFVTRLAMTLAVPCLIFTTLVAADIEPRALAQLSMAAILCYGLITLG
AWVVVRMFRLDTRAYLAPLTFGNTGNLGLPLALFAFGETGLGLAVVIFAVMAIIMFTVGLWMVAGVQNPLRVLREPILWA
SVLGVLFLSAGWTPPNVALNSLTLIGHMGIPLMLLTLGAAVARLKPARVLPAFGLSAIKLSIGLLVGIGVGLAFGLSGAP
LAVLILQMATPVGVTSYLMAERYKTDPDAAASLVVTSTLLAIVALPITLSFLLPG
>Mature_295_residues
MNLALTVLDITAPVFILGAAGFIWVRAGYEYPTAFVTRLAMTLAVPCLIFTTLVAADIEPRALAQLSMAAILCYGLITLG
AWVVVRMFRLDTRAYLAPLTFGNTGNLGLPLALFAFGETGLGLAVVIFAVMAIIMFTVGLWMVAGVQNPLRVLREPILWA
SVLGVLFLSAGWTPPNVALNSLTLIGHMGIPLMLLTLGAAVARLKPARVLPAFGLSAIKLSIGLLVGIGVGLAFGLSGAP
LAVLILQMATPVGVTSYLMAERYKTDPDAAASLVVTSTLLAIVALPITLSFLLPG

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 30873; Mature: 30873

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLALTVLDITAPVFILGAAGFIWVRAGYEYPTAFVTRLAMTLAVPCLIFTTLVAADIEP
CCEEEEEHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RALAQLSMAAILCYGLITLGAWVVVRMFRLDTRAYLAPLTFGNTGNLGLPLALFAFGETG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCCC
LGLAVVIFAVMAIIMFTVGLWMVAGVQNPLRVLREPILWASVLGVLFLSAGWTPPNVALN
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SLTLIGHMGIPLMLLTLGAAVARLKPARVLPAFGLSAIKLSIGLLVGIGVGLAFGLSGAP
HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCH
LAVLILQMATPVGVTSYLMAERYKTDPDAAASLVVTSTLLAIVALPITLSFLLPG
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLALTVLDITAPVFILGAAGFIWVRAGYEYPTAFVTRLAMTLAVPCLIFTTLVAADIEP
CCEEEEEHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RALAQLSMAAILCYGLITLGAWVVVRMFRLDTRAYLAPLTFGNTGNLGLPLALFAFGETG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHCCCC
LGLAVVIFAVMAIIMFTVGLWMVAGVQNPLRVLREPILWASVLGVLFLSAGWTPPNVALN
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SLTLIGHMGIPLMLLTLGAAVARLKPARVLPAFGLSAIKLSIGLLVGIGVGLAFGLSGAP
HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCH
LAVLILQMATPVGVTSYLMAERYKTDPDAAASLVVTSTLLAIVALPITLSFLLPG
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]