| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052904
Identifier: 89052904
GI number: 89052904
Start: 416655
End: 417665
Strand: Direct
Name: 89052904
Synonym: Jann_0413
Alternate gene names: NA
Gene position: 416655-417665 (Clockwise)
Preceding gene: 89052898
Following gene: 89052905
Centisome position: 9.65
GC content: 60.73
Gene sequence:
>1011_bases ATGAAAAAGGTTCTCTTCGCAACCACGGCGCTGATCGCGACCGCTGGCATTGCAGCAGCCGATGGCCACACCGGCGTCGC GCTGTCCGGTTCCGCCGAAATGGGCGTCATCGGTGGCGACAACACCAACACTCAGTTCTGGACGCACGTTGACGTGACGT TCACGCTCTCCGGCGAAACCGACGGCGGCATCACTTTTGGTGCAGCAGTTGATCTCGACGAAGCTGGCGACGCAATCGAC ACCGCAGACGGCCGTGACGGCGTTGCGATCTTCATCTCCGGCGACTTCGGTACGCTGACGATGGGTGACACCGATGGCGC TCTCGACTTCGCTATGCAGGAAGTTGCAGTCAACAACGCTGGTTCCATCGCGGACGACGAGACGGCCCACGGCGGCTACC TCGGCTCCTACGGTGACGGCGCATATGACGGCCAGATCCTGCGTTACGACTACTCCATCGCTGACTTCGCGTTCGCAGTG TCCGTTGAGCTCGACGACGCCGACGTTCGTGACGTTGGTTACGCCTTGGGTGCAACCTACAACCTCTCCTTCGGTGGCGG TTCCGCTACCTTCGGTGCTGGTGTTCAGTTCATCGACGCGGTTAACTACAACCCCGGCAACACCAACGCATTCACCGGCC AGGATCTGGACGGCGAGTACCTGATCTACGGTGTGTCCGCATCTGTGTCCCTCGACAACGGCCTGGCCGTTGGCATCGCC TACACGGACTATCAGTCCGAAGAGGCTGTTGCTGATGACGAGTACACGCATATCGGTTTCGGCGCGGGTTACACCTTCGA CGCAATCACCGTGTCCGCCAACTACGGCATGTGGGAAATCGACGCCGACGGCGCCGCACCTGACGAAGAGATCACGGGTT ACGGCCTCGCCGCTGCCTATGACTTCGGTGGCGGTCTCTCCGCTCACCTCGGTTACAACATGACCGAGACGGATGCTCCT GCTGGCGCAGACAACTCCACCTGGTCCCTGGGCCTGGCAATGTCCTTCTAA
Upstream 100 bases:
>100_bases TTCTTGCAATCAAAGAGGTGAAAGGCGAAACACCATGCATACCCAATTCGGGCGTTCCGCTTTGGGGTTAAGTTTTTCAA GTGAACACAAGGGAAAAACC
Downstream 100 bases:
>100_bases TCCAACCGGATTAGTTCGATTTGGGAAGAGCGGGCCTTGTGCCCGCTCTTTTCTTTTGGTGAACCTGCCTGCATGGCATT GTCTGATATCACCACCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGETDGGITFGAAVDLDEAGDAID TADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNAGSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAV SVELDDADVRDVGYALGATYNLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAYDFGGGLSAHLGYNMTETDAP AGADNSTWSLGLAMSF
Sequences:
>Translated_336_residues MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGETDGGITFGAAVDLDEAGDAID TADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNAGSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAV SVELDDADVRDVGYALGATYNLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAYDFGGGLSAHLGYNMTETDAP AGADNSTWSLGLAMSF >Mature_336_residues MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGETDGGITFGAAVDLDEAGDAID TADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNAGSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAV SVELDDADVRDVGYALGATYNLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAYDFGGGLSAHLGYNMTETDAP AGADNSTWSLGLAMSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34372; Mature: 34372
Theoretical pI: Translated: 3.36; Mature: 3.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGET CCEEEEEHHHHHHHCCEEECCCCCCEEEECCCCEEEEECCCCCCEEEEEEEEEEEECCCC DGGITFGAAVDLDEAGDAIDTADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNA CCCEEEEEEEECHHCCCCEECCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCC GSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAVSVELDDADVRDVGYALGATY CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEECCCCHHHHHHHHCCEE NLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEE YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAY EECCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEE DFGGGLSAHLGYNMTETDAPAGADNSTWSLGLAMSF ECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGET CCEEEEEHHHHHHHCCEEECCCCCCEEEECCCCEEEEECCCCCCEEEEEEEEEEEECCCC DGGITFGAAVDLDEAGDAIDTADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNA CCCEEEEEEEECHHCCCCEECCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCC GSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAVSVELDDADVRDVGYALGATY CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEECCCCHHHHHHHHCCEE NLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEE YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAY EECCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEE DFGGGLSAHLGYNMTETDAPAGADNSTWSLGLAMSF ECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA