Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052904

Identifier: 89052904

GI number: 89052904

Start: 416655

End: 417665

Strand: Direct

Name: 89052904

Synonym: Jann_0413

Alternate gene names: NA

Gene position: 416655-417665 (Clockwise)

Preceding gene: 89052898

Following gene: 89052905

Centisome position: 9.65

GC content: 60.73

Gene sequence:

>1011_bases
ATGAAAAAGGTTCTCTTCGCAACCACGGCGCTGATCGCGACCGCTGGCATTGCAGCAGCCGATGGCCACACCGGCGTCGC
GCTGTCCGGTTCCGCCGAAATGGGCGTCATCGGTGGCGACAACACCAACACTCAGTTCTGGACGCACGTTGACGTGACGT
TCACGCTCTCCGGCGAAACCGACGGCGGCATCACTTTTGGTGCAGCAGTTGATCTCGACGAAGCTGGCGACGCAATCGAC
ACCGCAGACGGCCGTGACGGCGTTGCGATCTTCATCTCCGGCGACTTCGGTACGCTGACGATGGGTGACACCGATGGCGC
TCTCGACTTCGCTATGCAGGAAGTTGCAGTCAACAACGCTGGTTCCATCGCGGACGACGAGACGGCCCACGGCGGCTACC
TCGGCTCCTACGGTGACGGCGCATATGACGGCCAGATCCTGCGTTACGACTACTCCATCGCTGACTTCGCGTTCGCAGTG
TCCGTTGAGCTCGACGACGCCGACGTTCGTGACGTTGGTTACGCCTTGGGTGCAACCTACAACCTCTCCTTCGGTGGCGG
TTCCGCTACCTTCGGTGCTGGTGTTCAGTTCATCGACGCGGTTAACTACAACCCCGGCAACACCAACGCATTCACCGGCC
AGGATCTGGACGGCGAGTACCTGATCTACGGTGTGTCCGCATCTGTGTCCCTCGACAACGGCCTGGCCGTTGGCATCGCC
TACACGGACTATCAGTCCGAAGAGGCTGTTGCTGATGACGAGTACACGCATATCGGTTTCGGCGCGGGTTACACCTTCGA
CGCAATCACCGTGTCCGCCAACTACGGCATGTGGGAAATCGACGCCGACGGCGCCGCACCTGACGAAGAGATCACGGGTT
ACGGCCTCGCCGCTGCCTATGACTTCGGTGGCGGTCTCTCCGCTCACCTCGGTTACAACATGACCGAGACGGATGCTCCT
GCTGGCGCAGACAACTCCACCTGGTCCCTGGGCCTGGCAATGTCCTTCTAA

Upstream 100 bases:

>100_bases
TTCTTGCAATCAAAGAGGTGAAAGGCGAAACACCATGCATACCCAATTCGGGCGTTCCGCTTTGGGGTTAAGTTTTTCAA
GTGAACACAAGGGAAAAACC

Downstream 100 bases:

>100_bases
TCCAACCGGATTAGTTCGATTTGGGAAGAGCGGGCCTTGTGCCCGCTCTTTTCTTTTGGTGAACCTGCCTGCATGGCATT
GTCTGATATCACCACCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGETDGGITFGAAVDLDEAGDAID
TADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNAGSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAV
SVELDDADVRDVGYALGATYNLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA
YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAYDFGGGLSAHLGYNMTETDAP
AGADNSTWSLGLAMSF

Sequences:

>Translated_336_residues
MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGETDGGITFGAAVDLDEAGDAID
TADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNAGSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAV
SVELDDADVRDVGYALGATYNLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA
YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAYDFGGGLSAHLGYNMTETDAP
AGADNSTWSLGLAMSF
>Mature_336_residues
MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGETDGGITFGAAVDLDEAGDAID
TADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNAGSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAV
SVELDDADVRDVGYALGATYNLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA
YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAYDFGGGLSAHLGYNMTETDAP
AGADNSTWSLGLAMSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34372; Mature: 34372

Theoretical pI: Translated: 3.36; Mature: 3.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGET
CCEEEEEHHHHHHHCCEEECCCCCCEEEECCCCEEEEECCCCCCEEEEEEEEEEEECCCC
DGGITFGAAVDLDEAGDAIDTADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNA
CCCEEEEEEEECHHCCCCEECCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCC
GSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAVSVELDDADVRDVGYALGATY
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEECCCCHHHHHHHHCCEE
NLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA
EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEE
YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAY
EECCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEE
DFGGGLSAHLGYNMTETDAPAGADNSTWSLGLAMSF
ECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKKVLFATTALIATAGIAAADGHTGVALSGSAEMGVIGGDNTNTQFWTHVDVTFTLSGET
CCEEEEEHHHHHHHCCEEECCCCCCEEEECCCCEEEEECCCCCCEEEEEEEEEEEECCCC
DGGITFGAAVDLDEAGDAIDTADGRDGVAIFISGDFGTLTMGDTDGALDFAMQEVAVNNA
CCCEEEEEEEECHHCCCCEECCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCC
GSIADDETAHGGYLGSYGDGAYDGQILRYDYSIADFAFAVSVELDDADVRDVGYALGATY
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEECCCCHHHHHHHHCCEE
NLSFGGGSATFGAGVQFIDAVNYNPGNTNAFTGQDLDGEYLIYGVSASVSLDNGLAVGIA
EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEE
YTDYQSEEAVADDEYTHIGFGAGYTFDAITVSANYGMWEIDADGAAPDEEITGYGLAAAY
EECCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEE
DFGGGLSAHLGYNMTETDAPAGADNSTWSLGLAMSF
ECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA