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The map label for this gene is ytfH [C]

Identifier: 89052852

GI number: 89052852

Start: 365165

End: 365584

Strand: Direct

Name: ytfH [C]

Synonym: Jann_0361

Alternate gene names: 89052852

Gene position: 365165-365584 (Clockwise)

Preceding gene: 89052848

Following gene: 89052853

Centisome position: 8.46

GC content: 64.29

Gene sequence:

>420_bases
GTGGCGCTGGATGACGACACCAATCGGGGACCGGGCGTGTCCCTTCTGACCGGGCTCGACATGAGCCATATCACGCTGTG
CCCGGCCATCGCGTTCAACAAGATCGTCGGCGGGCGCTACAAGCTGCACATCCTCTGCGTCCTGCATCGCGGCCCGCTGC
GCTTCGGCGAGATTGGGCGGTCGCTGGTCAAAGGGGGCCTCGGCAAGCCGGTGACGCCGCGAATTCTGAGCCGGGAGCTG
AAGGATATGACCGAACTGGGCCTGCTCGACCGCAAGGAGTATCCGGTTGTGCCCAAGAAGGTCGAATACGCGCTCGGCCC
GCGCGGTAAGGCCCTTCTGCCGATCCTGTCGGAGATCGTCCGTTGGGGCGCGACGGGCGTTCATGAGGACATGCTTGAGG
TGTCGCAAAGCCGACATTAG

Upstream 100 bases:

>100_bases
CATCTGTCATGGTCGGTCTCCTCTTGGTCATTGATTATAGGTTAGCGGGGGTGGTACGTTTTCGTAAATACGGACAAAAA
CGATAGTATGGAGATTTGCC

Downstream 100 bases:

>100_bases
CCGCGCGGCAGCGACGTCGCGGTAAGGGCTCCGACCGGCACATCGCCGTCGCCGCCCCGCTCTATTGCCCGGCCGCACGA
TCCCGCCTACCCTCGCGCCC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MALDDDTNRGPGVSLLTGLDMSHITLCPAIAFNKIVGGRYKLHILCVLHRGPLRFGEIGRSLVKGGLGKPVTPRILSREL
KDMTELGLLDRKEYPVVPKKVEYALGPRGKALLPILSEIVRWGATGVHEDMLEVSQSRH

Sequences:

>Translated_139_residues
MALDDDTNRGPGVSLLTGLDMSHITLCPAIAFNKIVGGRYKLHILCVLHRGPLRFGEIGRSLVKGGLGKPVTPRILSREL
KDMTELGLLDRKEYPVVPKKVEYALGPRGKALLPILSEIVRWGATGVHEDMLEVSQSRH
>Mature_138_residues
ALDDDTNRGPGVSLLTGLDMSHITLCPAIAFNKIVGGRYKLHILCVLHRGPLRFGEIGRSLVKGGLGKPVTPRILSRELK
DMTELGLLDRKEYPVVPKKVEYALGPRGKALLPILSEIVRWGATGVHEDMLEVSQSRH

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15273; Mature: 15142

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDDDTNRGPGVSLLTGLDMSHITLCPAIAFNKIVGGRYKLHILCVLHRGPLRFGEIGR
CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHH
SLVKGGLGKPVTPRILSRELKDMTELGLLDRKEYPVVPKKVEYALGPRGKALLPILSEIV
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHH
RWGATGVHEDMLEVSQSRH
HHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ALDDDTNRGPGVSLLTGLDMSHITLCPAIAFNKIVGGRYKLHILCVLHRGPLRFGEIGR
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHH
SLVKGGLGKPVTPRILSRELKDMTELGLLDRKEYPVVPKKVEYALGPRGKALLPILSEIV
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHH
RWGATGVHEDMLEVSQSRH
HHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]