Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052851

Identifier: 89052851

GI number: 89052851

Start: 364586

End: 365074

Strand: Reverse

Name: 89052851

Synonym: Jann_0360

Alternate gene names: NA

Gene position: 365074-364586 (Counterclockwise)

Preceding gene: 89052854

Following gene: 89052850

Centisome position: 8.45

GC content: 66.87

Gene sequence:

>489_bases
ATGACAGATGCCCAGACCCGCGCGCCCCATGGCGGGGTCACCGCGACCACAGACCCCACGACCGGGGAGGTTGAAGCCTC
CGCCCTGTTCGGCACCACGCCCGAACGCCTGTTCCGGGCGATCACGACGAAGGAAATCTGCACCTGGTGGGTCCGGCCGG
GCGTCTTCAACACCGAAGACTGGAGCGGCGATGTCCGCGAAGGCGGTCGGTGGGCCGCTGCCGGAATTGGCGGCGGACAG
CCCTATCAACTGGAAGGGGAATTCGTCACCGTCGAGGACCCACGCAGGCTTGCACAGACCTGGACGCCCGTTGGCGCCCC
ATTCGAGCCTGCACTGCTAACCTACGACCTGACCCCGCAACCGGGCGGCGTGCACCTGACCCTGCGCCACAGCGGCCTGC
CCAATGCAGATGTGTGCGAAAAGACCCGCGCCGGGTGGGAAACCAGCCTTGCGCGGCTTCAGGAGATCATCGCCGCCGAG
AAGGAATAG

Upstream 100 bases:

>100_bases
CCAGCGCCACGGCAAATCTCCATACTATCGTTTTTGTCCGTATTTACGAAAACGTACCACCCCCGCTAACCTATAATCAA
TGACCAAGAGGAGACCGACC

Downstream 100 bases:

>100_bases
CCCGGAATGGCCTATGATAACGCCCTTGCCGCCCGCGTCCGACACGCCCTGTCGGATGTGGACGATCTGCGGGACCAGAA
GATGATGGGGGCGCTTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTDAQTRAPHGGVTATTDPTTGEVEASALFGTTPERLFRAITTKEICTWWVRPGVFNTEDWSGDVREGGRWAAAGIGGGQ
PYQLEGEFVTVEDPRRLAQTWTPVGAPFEPALLTYDLTPQPGGVHLTLRHSGLPNADVCEKTRAGWETSLARLQEIIAAE
KE

Sequences:

>Translated_162_residues
MTDAQTRAPHGGVTATTDPTTGEVEASALFGTTPERLFRAITTKEICTWWVRPGVFNTEDWSGDVREGGRWAAAGIGGGQ
PYQLEGEFVTVEDPRRLAQTWTPVGAPFEPALLTYDLTPQPGGVHLTLRHSGLPNADVCEKTRAGWETSLARLQEIIAAE
KE
>Mature_161_residues
TDAQTRAPHGGVTATTDPTTGEVEASALFGTTPERLFRAITTKEICTWWVRPGVFNTEDWSGDVREGGRWAAAGIGGGQP
YQLEGEFVTVEDPRRLAQTWTPVGAPFEPALLTYDLTPQPGGVHLTLRHSGLPNADVCEKTRAGWETSLARLQEIIAAEK
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17576; Mature: 17444

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAQTRAPHGGVTATTDPTTGEVEASALFGTTPERLFRAITTKEICTWWVRPGVFNTED
CCCCCCCCCCCCEEECCCCCCCCEEEHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
WSGDVREGGRWAAAGIGGGQPYQLEGEFVTVEDPRRLAQTWTPVGAPFEPALLTYDLTPQ
CCCCCCCCCEEEEECCCCCCCEEECCCEEEECCHHHHHHHCCCCCCCCCCEEEEEECCCC
PGGVHLTLRHSGLPNADVCEKTRAGWETSLARLQEIIAAEKE
CCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDAQTRAPHGGVTATTDPTTGEVEASALFGTTPERLFRAITTKEICTWWVRPGVFNTED
CCCCCCCCCCCEEECCCCCCCCEEEHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
WSGDVREGGRWAAAGIGGGQPYQLEGEFVTVEDPRRLAQTWTPVGAPFEPALLTYDLTPQ
CCCCCCCCCEEEEECCCCCCCEEECCCEEEECCHHHHHHHCCCCCCCCCCEEEEEECCCC
PGGVHLTLRHSGLPNADVCEKTRAGWETSLARLQEIIAAEKE
CCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA