Click here to switch to the map view.

The map label for this gene is petA [H]

Identifier: 89052816

GI number: 89052816

Start: 330608

End: 331183

Strand: Direct

Name: petA [H]

Synonym: Jann_0325

Alternate gene names: 89052816

Gene position: 330608-331183 (Clockwise)

Preceding gene: 89052815

Following gene: 89052817

Centisome position: 7.66

GC content: 62.67

Gene sequence:

>576_bases
GTGTCAGATACGCATGATCCGTCCGGCGATCGCCGGGATTTTCTGTACTACGCCACGGCCGGTACCGGTGTGGTGGTCGC
AGGTGCAGCGGCTTGGCCGCTGGTGAACTCCATGAACCCATCCGCTGACGTACAGGCGGCCAGCCAATTGCGGGTCGACG
TCGGAGGTGTCGAGCCCGGCACGCAGCTGACGGTCCTGTTCCTGGGCAAGCCGATCTTCATCCGTCGCCGCACGGAAGAC
GAGATCGAAGCAGGCCGCGCGGTTGAGGTCAGCGAGTTGATCGATGCCAACGCACGCAACGCCAACGATGAGAGTGCTGA
TGCCGCAGACATCAACCGGACCCTGACCACGTCAGACGGTGAAAACTCCGGCGAGTGGCTGGTGATGCAGGGCGTCTGTA
CGCACTTGGGTTGCGTGCCCATTGGCGAAGGCGCTGGTGACTTCGGTGGCTGGTTCTGCCCCTGCCACGGCTCTCACTAT
GACACGGCAGGCCGCATCCGTCGCGGCCCTGCGCCCGAGAACCTGCCCATTCCTGCGGCAGAGTTTATCGACGATTCAAC
CATTTTGCTCGGTTAA

Upstream 100 bases:

>100_bases
GTAACAGCAATAGTAGCTTGGTGATGGAGAGATTCCGTCCCGCATCAGACGTTTCCAGGTTCAAAGACGTTTGGACCCAG
AGTGAAAGGACGCAGAGCTC

Downstream 100 bases:

>100_bases
GGGAGGAACGACATCATGGGTGGTATTCCCCACGACCATTACGAACCGAATTCTCGCGGCGAGAAATGGCTTCACCGCCG
CTTGCCGATTGTCGGTCTGA

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSDTHDPSGDRRDFLYYATAGTGVVVAGAAAWPLVNSMNPSADVQAASQLRVDVGGVEPGTQLTVLFLGKPIFIRRRTED
EIEAGRAVEVSELIDANARNANDESADAADINRTLTTSDGENSGEWLVMQGVCTHLGCVPIGEGAGDFGGWFCPCHGSHY
DTAGRIRRGPAPENLPIPAAEFIDDSTILLG

Sequences:

>Translated_191_residues
MSDTHDPSGDRRDFLYYATAGTGVVVAGAAAWPLVNSMNPSADVQAASQLRVDVGGVEPGTQLTVLFLGKPIFIRRRTED
EIEAGRAVEVSELIDANARNANDESADAADINRTLTTSDGENSGEWLVMQGVCTHLGCVPIGEGAGDFGGWFCPCHGSHY
DTAGRIRRGPAPENLPIPAAEFIDDSTILLG
>Mature_190_residues
SDTHDPSGDRRDFLYYATAGTGVVVAGAAAWPLVNSMNPSADVQAASQLRVDVGGVEPGTQLTVLFLGKPIFIRRRTEDE
IEAGRAVEVSELIDANARNANDESADAADINRTLTTSDGENSGEWLVMQGVCTHLGCVPIGEGAGDFGGWFCPCHGSHYD
TAGRIRRGPAPENLPIPAAEFIDDSTILLG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=193, Percent_Identity=41.9689119170984, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17540418, Length=190, Percent_Identity=38.9473684210526, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320811, Length=181, Percent_Identity=43.0939226519337, Blast_Score=155, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24580896, Length=158, Percent_Identity=44.3037974683544, Blast_Score=136, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 20171; Mature: 20040

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTHDPSGDRRDFLYYATAGTGVVVAGAAAWPLVNSMNPSADVQAASQLRVDVGGVEPG
CCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHCCCCCCCCHHEHHEEEEEECCCCCC
TQLTVLFLGKPIFIRRRTEDEIEAGRAVEVSELIDANARNANDESADAADINRTLTTSDG
CEEEEEEECCEEEEEECCCHHHHCCCEEEHHHHHCCCCCCCCCCCCCHHHCCCEEECCCC
ENSGEWLVMQGVCTHLGCVPIGEGAGDFGGWFCPCHGSHYDTAGRIRRGPAPENLPIPAA
CCCCCEEEEECHHHHCCCEECCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHH
EFIDDSTILLG
HHCCCCEEEEC
>Mature Secondary Structure 
SDTHDPSGDRRDFLYYATAGTGVVVAGAAAWPLVNSMNPSADVQAASQLRVDVGGVEPG
CCCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHCCCCCCCCHHEHHEEEEEECCCCCC
TQLTVLFLGKPIFIRRRTEDEIEAGRAVEVSELIDANARNANDESADAADINRTLTTSDG
CEEEEEEECCEEEEEECCCHHHHCCCEEEHHHHHCCCCCCCCCCCCCHHHCCCEEECCCC
ENSGEWLVMQGVCTHLGCVPIGEGAGDFGGWFCPCHGSHYDTAGRIRRGPAPENLPIPAA
CCCCCEEEEECHHHHCCCEECCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHH
EFIDDSTILLG
HHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2821268; 3004982; 2821272; 1323023; 1313292 [H]