Click here to switch to the map view.

The map label for this gene is ssuC [C]

Identifier: 89052799

GI number: 89052799

Start: 315059

End: 316594

Strand: Direct

Name: ssuC [C]

Synonym: Jann_0308

Alternate gene names: 89052799

Gene position: 315059-316594 (Clockwise)

Preceding gene: 89052798

Following gene: 89052800

Centisome position: 7.3

GC content: 64.91

Gene sequence:

>1536_bases
ATGCCCCGTCGTATCCCTTGGTTCGGCCCGGTCCTGGCTGTCCTGATTTGGGAGCTGCTCGGGCGCAGTTTGACAGATGC
GTTCGTGCTTGCCGCGCCATCAGCGATCCTTGGGTATCTGTTTGAGAATGCAGGTCTGATGACCCGCGCCTTGATCGAGA
CGTTGAAGAATGCAGCGGCGGGTTTTATGATTGGCAACCTGGCTGCTGTCGCGCTGGCGATCATCGCAACCGTCTGGCCC
CGCAGCGATGCGATGGTGCGAGGGTTGGCGCTGGTGGTGTTTTGCCTGCCGCTGGTCGCGACCGGGCCGATCCTTCGGGT
CGTCTTTGGACCGGGTGATGGGCCACAGATCGTCCTTGCCGCGCTAGCCGTCTACTACACCACGCTGATCCCCTTGCTTG
TTGGCCTGCGTGCCTTGCCGTCGGGCTGGCTGGATCTGGTGCGCAGCTACGGGCGTGGGCGTCTGGCGGCGCTGATCCAC
GTGCGCGCGATGGCCGCGTTGCCGTACTTTGTGGCGGGGTTGCAGATCGCGGCCCCGGCCGCGTTTCTGGGCGCGATGGT
GGGGGAGTTTACCGGGGCGGAGCGGGGCATGGGCGTGCTGACGATCCGGGCCATGCGCGGGATGAATGTGGAGATGACAT
GGGCCCTTGCGGTCGTGGCCACAGCCGTCGCTGTTCTGGGATATGCAGCGATTGGATGGATTGCGCGGAAGACGTTGCGC
GATGAGCCTCCGGTCATCCTTGCACCGCCGTCTGTCGGGCGTCGCGGCAACGCTTGGATGACCTTGATTGGCGTGACCGT
TGCGCTCCTGGTCATTTGGTGGGGTGGATTGCAGATCCTGAATGTCAGCCCGTTCTTCGCCAAGGGTCCGGCCGAGGTGT
TCGACGCGCTCTTCCTCGCTCCTGACGCGGGTGTTGTTCGTGCGACGCTAATGGAGGCGCTAGGCGAAACGGCGGTGTTC
CTGCTGCCCGGCTATGCCGCGGGGATCGGGGTCGGCGCGCTCCTCGCGATGCTCCTCGTTGTTATGCCGTCCTTGGCGGG
CACGGCGATGCCCCTGGCGATCGCGCTGCGATCTGTGCCCATCATTACGACGGCTCCGCTGGTTGTTTTGTTTACAGGAC
GGGGGGCCGTCGGCACCATCGTTCTCGTGGCCATCATGGTCTTCTTCCCGACATTTGTCGCCTGTCTCCACGGCCTCCGC
CAAGCGCCAGGGCGGGTGATCGACGTCATGCGCAGCTATGCCGCCAGCCCGTTTGATGTGCTGACCCGCGTGCGCGTCCC
CGCGATGCTGCCCGCGTTCTTTGCAGCGGCCCGGATGAACGTCCCGGCCTCTGTCCTTGCGGTCACGGTGGTGGAGTGGC
TGGCGACGGGCAACGGCATCGGCAGCCTGATGGCCCTGTCGGCGTCGCAATCGGATTACGACATGCTGTGGAGTTCCGTC
GTTCTGGTCGCGGTGCTGTCTTCGCTCGGCTATGCGGGCGTCGGCTGGCTGGAGCGGCGCGTTCTGGCCACCTACGCACC
GGAGCAACTGACATGA

Upstream 100 bases:

>100_bases
CGGATCTGGTTGAAGCTGTCTTCGCCGCGCTCTCGGAAGGGATGGCGGAGACAATGCCGAAGGCCGCGCAATGAGCTTTG
CGCAAGCGGAGCATCAATGG

Downstream 100 bases:

>100_bases
GACAAGCGGCGTTTGCCATTCCGGGCGACATCAACATCATAACCGGCGGCTATATCTACGAAAAACGACTGCTGGAGGAA
TTGCGCGCGCTTGGCCATGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MPRRIPWFGPVLAVLIWELLGRSLTDAFVLAAPSAILGYLFENAGLMTRALIETLKNAAAGFMIGNLAAVALAIIATVWP
RSDAMVRGLALVVFCLPLVATGPILRVVFGPGDGPQIVLAALAVYYTTLIPLLVGLRALPSGWLDLVRSYGRGRLAALIH
VRAMAALPYFVAGLQIAAPAAFLGAMVGEFTGAERGMGVLTIRAMRGMNVEMTWALAVVATAVAVLGYAAIGWIARKTLR
DEPPVILAPPSVGRRGNAWMTLIGVTVALLVIWWGGLQILNVSPFFAKGPAEVFDALFLAPDAGVVRATLMEALGETAVF
LLPGYAAGIGVGALLAMLLVVMPSLAGTAMPLAIALRSVPIITTAPLVVLFTGRGAVGTIVLVAIMVFFPTFVACLHGLR
QAPGRVIDVMRSYAASPFDVLTRVRVPAMLPAFFAAARMNVPASVLAVTVVEWLATGNGIGSLMALSASQSDYDMLWSSV
VLVAVLSSLGYAGVGWLERRVLATYAPEQLT

Sequences:

>Translated_511_residues
MPRRIPWFGPVLAVLIWELLGRSLTDAFVLAAPSAILGYLFENAGLMTRALIETLKNAAAGFMIGNLAAVALAIIATVWP
RSDAMVRGLALVVFCLPLVATGPILRVVFGPGDGPQIVLAALAVYYTTLIPLLVGLRALPSGWLDLVRSYGRGRLAALIH
VRAMAALPYFVAGLQIAAPAAFLGAMVGEFTGAERGMGVLTIRAMRGMNVEMTWALAVVATAVAVLGYAAIGWIARKTLR
DEPPVILAPPSVGRRGNAWMTLIGVTVALLVIWWGGLQILNVSPFFAKGPAEVFDALFLAPDAGVVRATLMEALGETAVF
LLPGYAAGIGVGALLAMLLVVMPSLAGTAMPLAIALRSVPIITTAPLVVLFTGRGAVGTIVLVAIMVFFPTFVACLHGLR
QAPGRVIDVMRSYAASPFDVLTRVRVPAMLPAFFAAARMNVPASVLAVTVVEWLATGNGIGSLMALSASQSDYDMLWSSV
VLVAVLSSLGYAGVGWLERRVLATYAPEQLT
>Mature_510_residues
PRRIPWFGPVLAVLIWELLGRSLTDAFVLAAPSAILGYLFENAGLMTRALIETLKNAAAGFMIGNLAAVALAIIATVWPR
SDAMVRGLALVVFCLPLVATGPILRVVFGPGDGPQIVLAALAVYYTTLIPLLVGLRALPSGWLDLVRSYGRGRLAALIHV
RAMAALPYFVAGLQIAAPAAFLGAMVGEFTGAERGMGVLTIRAMRGMNVEMTWALAVVATAVAVLGYAAIGWIARKTLRD
EPPVILAPPSVGRRGNAWMTLIGVTVALLVIWWGGLQILNVSPFFAKGPAEVFDALFLAPDAGVVRATLMEALGETAVFL
LPGYAAGIGVGALLAMLLVVMPSLAGTAMPLAIALRSVPIITTAPLVVLFTGRGAVGTIVLVAIMVFFPTFVACLHGLRQ
APGRVIDVMRSYAASPFDVLTRVRVPAMLPAFFAAARMNVPASVLAVTVVEWLATGNGIGSLMALSASQSDYDMLWSSVV
LVAVLSSLGYAGVGWLERRVLATYAPEQLT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=221, Percent_Identity=26.2443438914027, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI87081802, Length=144, Percent_Identity=29.1666666666667, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 53651; Mature: 53520

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRIPWFGPVLAVLIWELLGRSLTDAFVLAAPSAILGYLFENAGLMTRALIETLKNAAA
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GFMIGNLAAVALAIIATVWPRSDAMVRGLALVVFCLPLVATGPILRVVFGPGDGPQIVLA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
ALAVYYTTLIPLLVGLRALPSGWLDLVRSYGRGRLAALIHVRAMAALPYFVAGLQIAAPA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLGAMVGEFTGAERGMGVLTIRAMRGMNVEMTWALAVVATAVAVLGYAAIGWIARKTLR
HHHHHHHHHHCCCCCCCCEEEEEHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEPPVILAPPSVGRRGNAWMTLIGVTVALLVIWWGGLQILNVSPFFAKGPAEVFDALFLA
CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHC
PDAGVVRATLMEALGETAVFLLPGYAAGIGVGALLAMLLVVMPSLAGTAMPLAIALRSVP
CCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
IITTAPLVVLFTGRGAVGTIVLVAIMVFFPTFVACLHGLRQAPGRVIDVMRSYAASPFDV
CEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHH
LTRVRVPAMLPAFFAAARMNVPASVLAVTVVEWLATGNGIGSLMALSASQSDYDMLWSSV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHH
VLVAVLSSLGYAGVGWLERRVLATYAPEQLT
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PRRIPWFGPVLAVLIWELLGRSLTDAFVLAAPSAILGYLFENAGLMTRALIETLKNAAA
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GFMIGNLAAVALAIIATVWPRSDAMVRGLALVVFCLPLVATGPILRVVFGPGDGPQIVLA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
ALAVYYTTLIPLLVGLRALPSGWLDLVRSYGRGRLAALIHVRAMAALPYFVAGLQIAAPA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLGAMVGEFTGAERGMGVLTIRAMRGMNVEMTWALAVVATAVAVLGYAAIGWIARKTLR
HHHHHHHHHHCCCCCCCCEEEEEHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEPPVILAPPSVGRRGNAWMTLIGVTVALLVIWWGGLQILNVSPFFAKGPAEVFDALFLA
CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHC
PDAGVVRATLMEALGETAVFLLPGYAAGIGVGALLAMLLVVMPSLAGTAMPLAIALRSVP
CCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
IITTAPLVVLFTGRGAVGTIVLVAIMVFFPTFVACLHGLRQAPGRVIDVMRSYAASPFDV
CEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHH
LTRVRVPAMLPAFFAAARMNVPASVLAVTVVEWLATGNGIGSLMALSASQSDYDMLWSSV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHH
VLVAVLSSLGYAGVGWLERRVLATYAPEQLT
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]