| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is nudG [H]
Identifier: 89052783
GI number: 89052783
Start: 300162
End: 300548
Strand: Direct
Name: nudG [H]
Synonym: Jann_0292
Alternate gene names: 89052783
Gene position: 300162-300548 (Clockwise)
Preceding gene: 89052782
Following gene: 89052786
Centisome position: 6.95
GC content: 61.76
Gene sequence:
>387_bases TTGGTGTCCGCCGTCGCCCTGATCGACGCAGAGGGGCGTTTGTTGCTCGCGCAGCGGCCCGAAGGGAAGTCCATGGCCGG CCTGTGGGAATTTCCCGGCGGCAAGGTTGAAGACGGTGAAACGCCGGAACAGGCATTGATCCGGGAGTTGCAGGAAGAGC TTGGCATCGACACTTGGGAAAGCTGCCTCGCGCCGCTGACCTTTGCCAGCCACGCCTACGAGACATTCCACCTGCTTATG CCGCTTTTTGCCTGCCGCAAATGGAACGGCATTCCGCAATCGCGGGAGGGGCAGACGCTCAAATGGGTGCGCGCGGCTGA TCTGCGCGATTACCCCATGCCTCCTGCCGATATTCCCCTGATCCCGATCCTTCGCGACTGGCTGTAA
Upstream 100 bases:
>100_bases TCGATCTGGGCCTCGGTTCCGGCGCGGCGACGGTCTGGACCTGTGACCTGACCCACGGATATATCCAGATCAACGCGGAT TATCGGTCGTGAGCATTCTT
Downstream 100 bases:
>100_bases CCGCAAGTTGTATACATGTGCGCAAAAAATGTGCAGAAAAATGCGCCAATCGGTCATTTTCTGAGTGCTTTGTTAATCTT TCTCAGTAGACTGAATTAAC
Product: mutator mutT protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MVSAVALIDAEGRLLLAQRPEGKSMAGLWEFPGGKVEDGETPEQALIRELQEELGIDTWESCLAPLTFASHAYETFHLLM PLFACRKWNGIPQSREGQTLKWVRAADLRDYPMPPADIPLIPILRDWL
Sequences:
>Translated_128_residues MVSAVALIDAEGRLLLAQRPEGKSMAGLWEFPGGKVEDGETPEQALIRELQEELGIDTWESCLAPLTFASHAYETFHLLM PLFACRKWNGIPQSREGQTLKWVRAADLRDYPMPPADIPLIPILRDWL >Mature_128_residues MVSAVALIDAEGRLLLAQRPEGKSMAGLWEFPGGKVEDGETPEQALIRELQEELGIDTWESCLAPLTFASHAYETFHLLM PLFACRKWNGIPQSREGQTLKWVRAADLRDYPMPPADIPLIPILRDWL
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=124, Percent_Identity=43.5483870967742, Blast_Score=89, Evalue=9e-20, Organism=Escherichia coli, GI1786288, Length=125, Percent_Identity=38.4, Blast_Score=77, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 14414; Mature: 14414
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSAVALIDAEGRLLLAQRPEGKSMAGLWEFPGGKVEDGETPEQALIRELQEELGIDTWE CCCEEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHH SCLAPLTFASHAYETFHLLMPLFACRKWNGIPQSREGQTLKWVRAADLRDYPMPPADIPL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHCCCCCCCCCCCCCCCCH IPILRDWL HHHHHHCC >Mature Secondary Structure MVSAVALIDAEGRLLLAQRPEGKSMAGLWEFPGGKVEDGETPEQALIRELQEELGIDTWE CCCEEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHH SCLAPLTFASHAYETFHLLMPLFACRKWNGIPQSREGQTLKWVRAADLRDYPMPPADIPL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHCCCCCCCCCCCCCCCCH IPILRDWL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]