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The map label for this gene is yafK [C]

Identifier: 89052763

GI number: 89052763

Start: 279277

End: 279759

Strand: Reverse

Name: yafK [C]

Synonym: Jann_0272

Alternate gene names: 89052763

Gene position: 279759-279277 (Counterclockwise)

Preceding gene: 89052764

Following gene: 89052762

Centisome position: 6.48

GC content: 57.97

Gene sequence:

>483_bases
ATGCGTTTTCTATTGATTGCTGTGTTGACCCTTGTTGCGCTGACCGGGTGCTCTCGGTTCATCGACTATGACGGTCCGCA
GGTGACCCGGGTCCTCGTCTACAAAGGCGAGCGCATGATGTATCTGATGCACAACAACGACGTGCTGGAGAGCTACGAGA
TCGAGCTTGGATTCGCCCCGGAAGGCCATAAGCTGGAGGAAGGCGATGGTCGCACGCCCGAGGGCGAATACATGATCGAC
CGGCGCAACCCCAACAGCCAGTGGTATCTGTCCATCGGCATCAGCTACCCCAATGAAGACGACATCGCCCAGGCCCGTGA
AAGGGGCGTCGATCCGGGCGGCGACATCTTTATCCACGGCACACCGCGCCCATTCCGCCGCGATCAAGACTGGACGGTAG
GGTGTATCGCGGTCACGAATGCGGAAATGCGCCAGATATACGCAATGGTAGAAAACGGAACGCCGATTTCGATCTACCCC
TGA

Upstream 100 bases:

>100_bases
CGGCCTCGCCGCGCTTCTTTCCGCTGAAAAGACCTCCTAGCTCTCGCCAGATCGCGGGCTTTCGGTGTAACAGGGACAAA
ACACAATAACGGGCAGGCCC

Downstream 100 bases:

>100_bases
GGGGCGGACGGAATCACCCTGAAGCACCTTGATTCGACGGCGTTAAAAGGTTCCATACGGGTTCAAAAAAGAAACGGATG
AGGCGATATTCCGCCGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRFLLIAVLTLVALTGCSRFIDYDGPQVTRVLVYKGERMMYLMHNNDVLESYEIELGFAPEGHKLEEGDGRTPEGEYMID
RRNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAVTNAEMRQIYAMVENGTPISIYP

Sequences:

>Translated_160_residues
MRFLLIAVLTLVALTGCSRFIDYDGPQVTRVLVYKGERMMYLMHNNDVLESYEIELGFAPEGHKLEEGDGRTPEGEYMID
RRNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAVTNAEMRQIYAMVENGTPISIYP
>Mature_160_residues
MRFLLIAVLTLVALTGCSRFIDYDGPQVTRVLVYKGERMMYLMHNNDVLESYEIELGFAPEGHKLEEGDGRTPEGEYMID
RRNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAVTNAEMRQIYAMVENGTPISIYP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18236; Mature: 18236

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLLIAVLTLVALTGCSRFIDYDGPQVTRVLVYKGERMMYLMHNNDVLESYEIELGFAP
CHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCEEEEEEECCCCCEEEEEEEEECC
EGHKLEEGDGRTPEGEYMIDRRNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHG
CCCEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEEC
TPRPFRRDQDWTVGCIAVTNAEMRQIYAMVENGTPISIYP
CCCCCCCCCCCEEEEEEECCHHHHEEEEEECCCCEEEEEC
>Mature Secondary Structure
MRFLLIAVLTLVALTGCSRFIDYDGPQVTRVLVYKGERMMYLMHNNDVLESYEIELGFAP
CHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCEEEEEEECCCCCEEEEEEEEECC
EGHKLEEGDGRTPEGEYMIDRRNPNSQWYLSIGISYPNEDDIAQARERGVDPGGDIFIHG
CCCEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEEC
TPRPFRRDQDWTVGCIAVTNAEMRQIYAMVENGTPISIYP
CCCCCCCCCCCEEEEEEECCHHHHEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA