Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052744

Identifier: 89052744

GI number: 89052744

Start: 253176

End: 254657

Strand: Direct

Name: 89052744

Synonym: Jann_0253

Alternate gene names: NA

Gene position: 253176-254657 (Clockwise)

Preceding gene: 89052742

Following gene: 89052749

Centisome position: 5.86

GC content: 65.79

Gene sequence:

>1482_bases
ATGTGGCGGGTCATGAAACAGTGGATTTTCGCAAGCGTGGCCATGCTGGCGCTGGTGCTGGGCATCGTGGTGCAGGAGCG
CGCGCGGTTGGGCGTGGAGGTGCGTCACGACCATGTCGGCACGACGCCGGTGACGGTGACGCAAACGCCCGGGGCCGAAG
GGCCGGTGGTCGTGATCGTCCATGGCTTCGCGGGATCGCGGCAAATGATGAGCGCGTGGTCCCTGAGTTTCGCACGCGCG
GGTTACATTGCTGTGGCGCTGGACCTGGAAGGGCACGGGCGCAATCCGGTGCCGATGTCGGGCGATCTGACGTCTTTGGA
CGGCACGACGCGGATTTTGCTGGAGGAGATCTCGCGGGTCACCGATTGGGCGCTGGATCTGCCCGGCGCAGACGGTCGGG
TGGCGTTGGTGGGCCATTCCATGTCGTCCGATCTGGTCGTGCGCGCCGGGATCAATGACCCAAGGGTAGAGGCGGTTGTG
GGACTGTCCGTCTTTTCGCGCGCTGTGACACCTGATGAGCCCGCAAACCTGTTGATCCTGAACGGTGCCTGGGAAGGCGC
TTTGCGGGCGGAGGCGCAACGGGTGATGGCGGAGCTTGGCGCGGTGGAGGGCGAGACGGTCGGCGCACCCGGAGAGGATT
TCGCGCGCCGCGCCGTGGCGGTGCCTTTGGCGGAACATGTGAGTATCCTGTTCGCCGTCGGCGGCTTGCAGGAGGCCGTC
GATTGGCTGGGGGCCACGTTTGATCGGAATGGGGCGCAGGTGCCTCGGCTTGGGTGGGCGCTGTTGGTGATGTTGGCGGG
TGCGGTGATGTTGGCGCGCCCCTTTGCGGGTGTCTTGCCCACAGGCGCGCCGCCAGAAGCGTTGCCACGGCGCGTGTTCT
GGGCGTTGGCGCTTGTGCCCGCATTGGTCGTGCCGCCTGTGGCCGTGATGATGGACGTCGGCGCACTGCCCGTCCTGGTG
GCGGATTATCTGGCGGTCCATCTGGCCCTATACGGCACGTTAGTCATTGGCGGAGCACTGGTGGCCGGGTGGCGACCGGA
GGCGCGGGGATGGATTTGGGGTCTTGCATTGGCTGTGTTTGGCATCGGCCTGTTCGGGATGTTGCTGGACCGCTATGCGG
CGTCGTTCATTCCGCATCCGGGCCGCGTGGTGATCATCCTGGCGATTGTACCCGGCGCGATCCTGGCCATGTGGGCCGAC
GCGGTGCTGACGCAGGCCACGCGGGCGAAGCTCTGGCAACGGGCGGTGGTGCGGGGGGCGTTCCTGGGCTCGCTTGCATT
CGCCGTCGCGCTGGATTTTGAGCGACTGTTCTTCCTTGTCCTGATCTTCCCGGTGATCCTGCTGTTTTATGGCACGTTCG
GGATGATGGGCCGTTGGGTCGGGCGCCGAACCGGATCAACACTGGCGGTGGGCGTCGGGTTGGGCGCGCTATTGGGATGG
GCGTTGGGTGTGTCGTTCCCGATGTATGTGATGGGCGGCTAA

Upstream 100 bases:

>100_bases
TGGTCATGAGGGTGACGGTGAACATGGGCTCGAACCTCCGGTCGTGTTTTGGGCAACATAGGCGGCGGAGGCGTGCTGGA
CCAGTGGATTGGCGCGGGCT

Downstream 100 bases:

>100_bases
CACCGTTCACTGGGGCCTGCCCCCAAACGCACCCTATATTGGGGGCCTGCCCCCAAACCCCCGGAGTTGTACGGCCCAGA
TGAAAGACGAGCGCTTAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MWRVMKQWIFASVAMLALVLGIVVQERARLGVEVRHDHVGTTPVTVTQTPGAEGPVVVIVHGFAGSRQMMSAWSLSFARA
GYIAVALDLEGHGRNPVPMSGDLTSLDGTTRILLEEISRVTDWALDLPGADGRVALVGHSMSSDLVVRAGINDPRVEAVV
GLSVFSRAVTPDEPANLLILNGAWEGALRAEAQRVMAELGAVEGETVGAPGEDFARRAVAVPLAEHVSILFAVGGLQEAV
DWLGATFDRNGAQVPRLGWALLVMLAGAVMLARPFAGVLPTGAPPEALPRRVFWALALVPALVVPPVAVMMDVGALPVLV
ADYLAVHLALYGTLVIGGALVAGWRPEARGWIWGLALAVFGIGLFGMLLDRYAASFIPHPGRVVIILAIVPGAILAMWAD
AVLTQATRAKLWQRAVVRGAFLGSLAFAVALDFERLFFLVLIFPVILLFYGTFGMMGRWVGRRTGSTLAVGVGLGALLGW
ALGVSFPMYVMGG

Sequences:

>Translated_493_residues
MWRVMKQWIFASVAMLALVLGIVVQERARLGVEVRHDHVGTTPVTVTQTPGAEGPVVVIVHGFAGSRQMMSAWSLSFARA
GYIAVALDLEGHGRNPVPMSGDLTSLDGTTRILLEEISRVTDWALDLPGADGRVALVGHSMSSDLVVRAGINDPRVEAVV
GLSVFSRAVTPDEPANLLILNGAWEGALRAEAQRVMAELGAVEGETVGAPGEDFARRAVAVPLAEHVSILFAVGGLQEAV
DWLGATFDRNGAQVPRLGWALLVMLAGAVMLARPFAGVLPTGAPPEALPRRVFWALALVPALVVPPVAVMMDVGALPVLV
ADYLAVHLALYGTLVIGGALVAGWRPEARGWIWGLALAVFGIGLFGMLLDRYAASFIPHPGRVVIILAIVPGAILAMWAD
AVLTQATRAKLWQRAVVRGAFLGSLAFAVALDFERLFFLVLIFPVILLFYGTFGMMGRWVGRRTGSTLAVGVGLGALLGW
ALGVSFPMYVMGG
>Mature_493_residues
MWRVMKQWIFASVAMLALVLGIVVQERARLGVEVRHDHVGTTPVTVTQTPGAEGPVVVIVHGFAGSRQMMSAWSLSFARA
GYIAVALDLEGHGRNPVPMSGDLTSLDGTTRILLEEISRVTDWALDLPGADGRVALVGHSMSSDLVVRAGINDPRVEAVV
GLSVFSRAVTPDEPANLLILNGAWEGALRAEAQRVMAELGAVEGETVGAPGEDFARRAVAVPLAEHVSILFAVGGLQEAV
DWLGATFDRNGAQVPRLGWALLVMLAGAVMLARPFAGVLPTGAPPEALPRRVFWALALVPALVVPPVAVMMDVGALPVLV
ADYLAVHLALYGTLVIGGALVAGWRPEARGWIWGLALAVFGIGLFGMLLDRYAASFIPHPGRVVIILAIVPGAILAMWAD
AVLTQATRAKLWQRAVVRGAFLGSLAFAVALDFERLFFLVLIFPVILLFYGTFGMMGRWVGRRTGSTLAVGVGLGALLGW
ALGVSFPMYVMGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52173; Mature: 52173

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS01309 UPF0057

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRVMKQWIFASVAMLALVLGIVVQERARLGVEVRHDHVGTTPVTVTQTPGAEGPVVVIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCEEEEE
HGFAGSRQMMSAWSLSFARAGYIAVALDLEGHGRNPVPMSGDLTSLDGTTRILLEEISRV
ECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
TDWALDLPGADGRVALVGHSMSSDLVVRAGINDPRVEAVVGLSVFSRAVTPDEPANLLIL
HHHHEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
NGAWEGALRAEAQRVMAELGAVEGETVGAPGEDFARRAVAVPLAEHVSILFAVGGLQEAV
ECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
DWLGATFDRNGAQVPRLGWALLVMLAGAVMLARPFAGVLPTGAPPEALPRRVFWALALVP
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHH
ALVVPPVAVMMDVGALPVLVADYLAVHLALYGTLVIGGALVAGWRPEARGWIWGLALAVF
HHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GIGLFGMLLDRYAASFIPHPGRVVIILAIVPGAILAMWADAVLTQATRAKLWQRAVVRGA
HHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGSLAFAVALDFERLFFLVLIFPVILLFYGTFGMMGRWVGRRTGSTLAVGVGLGALLGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
ALGVSFPMYVMGG
HHHCCCCEEEECC
>Mature Secondary Structure
MWRVMKQWIFASVAMLALVLGIVVQERARLGVEVRHDHVGTTPVTVTQTPGAEGPVVVIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCEEEEE
HGFAGSRQMMSAWSLSFARAGYIAVALDLEGHGRNPVPMSGDLTSLDGTTRILLEEISRV
ECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
TDWALDLPGADGRVALVGHSMSSDLVVRAGINDPRVEAVVGLSVFSRAVTPDEPANLLIL
HHHHEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
NGAWEGALRAEAQRVMAELGAVEGETVGAPGEDFARRAVAVPLAEHVSILFAVGGLQEAV
ECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
DWLGATFDRNGAQVPRLGWALLVMLAGAVMLARPFAGVLPTGAPPEALPRRVFWALALVP
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHH
ALVVPPVAVMMDVGALPVLVADYLAVHLALYGTLVIGGALVAGWRPEARGWIWGLALAVF
HHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GIGLFGMLLDRYAASFIPHPGRVVIILAIVPGAILAMWADAVLTQATRAKLWQRAVVRGA
HHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGSLAFAVALDFERLFFLVLIFPVILLFYGTFGMMGRWVGRRTGSTLAVGVGLGALLGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
ALGVSFPMYVMGG
HHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA