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The map label for this gene is ytfM [C]

Identifier: 89052736

GI number: 89052736

Start: 240739

End: 242535

Strand: Reverse

Name: ytfM [C]

Synonym: Jann_0245

Alternate gene names: 89052736

Gene position: 242535-240739 (Counterclockwise)

Preceding gene: 89052738

Following gene: 89052735

Centisome position: 5.62

GC content: 62.83

Gene sequence:

>1797_bases
ATGGGTGGACGTCAGATAATCGCATCGGCACTTGTAGCCTGTGCCCTCGCAGGCGCAGGGCAGGCGCAGGATATTCAGCT
TTCGGCCCCGGGGGTCGATGAAGATCTGACAGATCGCCTGCGGGCCTCATCGCTGTTGCTGCAAGAGACGGAAGAGGTCC
GCACTGCACAGGATCTCATCGCAGCCGCACGTGCAGACTACGGACGCCTCGTCGCGGCCCTCTATGACGCGGGCCATTTC
TCCCCCGTTGTTCGCATTGACGTTGATGGGCGCGAAGCGGCGCGGATACCGCCATTTGGTGGCCCGCGATCCGTGAACCA
GATCACCATTCGCGTCGAACCCGGCCCCGTATTCCAGCTTGGCACAGCAGAGATTGCGCCGCTGGCTCCTGACACCGAAT
TACCGGGTGAATTCCGCCCCGGCGGTGCCGTCACCACAGGCCTTTTGCGCGACACCGCCAGTGCGGCCATCGGCGCCTGG
CGGGACAACGGCTATGCCACCGCAGAGGTCAGCGATCAGCAGATTACCGCGCGCAATGGGGATGCCGTCCTTGATGTGCG
CGTGCGCGTTGAGCCGGGGCAGATTGTCCAGTTCGGCACCCTCGTGCCCCGTGGGCAGGAGCGGATGCGCGTCGAACGCA
TTCTGGCAATCGCGGGTCTTCCGCAGGGTGAGACGTTCTCGCCGGACACGCTGGACCGGGTCGAAGGACGCTTGCAAGAC
ACCGGCGTCTTTTCTGCCATTGCCTTGCAAGAGGGCGACGTCGGCCCCGACGGCGTGATGAATATCGAGGCCACGCTGGT
GGAAAGTGAGCCGCGCCGTTTTGGCTTCGGGGCGGAGGTATCAACGGATGACGGCGCCTCTCTCAGCGCCTATTGGCTGC
ACCGCAACCTGTTCGGTGGGGCAGAGCGGCTTCGGATCGAGGGGGAGATCAGCGGCATCGGCTCAGAAGGGCTGAATGTG
GAAGATGTGGAAGGGATCGACGCCTCCGTCGGGCTGCGCTACTCGCGCCCCGCCACGTTCACGCCCGACACCACCGCTTA
TCTGGAACTTGGCCTGAACTATTTTGACGATCCGGCATTCACGTTCACCAATGTTGGCGCGGAAGTGGGTGTCGAGCATC
GTTTTGACCGCCGCCTGACCGGAACACTCGGCCTTGCAGTCGACTATTATGACATCCAGACGCCTTTCGGGAATGATCAG
ATTATCGTTCTGTCTACGCCACTTGGGATGACATGGGATCGCAGGGACGATCCGCTCGATGCCCGGGAGCTGTTCTATCT
GAACGGCACCGCAACACCGTTCATCACCGATCAGGGCGGCGCTGGTTCGCGCGTATATGTGGACGGCCGCGTCTATCTTG
GTTTTGGCGAAACCCGTGCCAGCCGCATCGCCGTGCGGGGGCAATTGGGCAGCGTCTTCGGGGGCGAGCTATCTGATATT
CCACCGGATTTCCTGTTTTTCTCGGGCGGCGTTGGAACCGTGCGGGGGCAGGAGTATCAATCGCTCGGCGCGATCCAGAA
CGGCATCGACGACGGCGGCCGCAGCTTTGCCGGTCTATCGACCGAGTTTCGCCAGGACATCGGAGAGACCAACTTCGGCC
TCGTGGCCTTTGCCGATGCCGGGTTCATTGGCACCGATGCGACGGGCGGCGAAGGTGATTGGCATGCGGGCGCGGGTCTT
GGCGTGCGATACGACACGCCCTTTGGCCCCATCCGCGTCGATCTCGCTACGCCCGTGCGCGGTGAGGGGGTCGGCGAGGA
CGTCTATATCTATATCGGCATCGGGCACGCGTTTTGA

Upstream 100 bases:

>100_bases
ATGTGCGGCAAGGCGCAAAAGGTCTCAACTTTCCGCCGCCGGGCGGGGAACCAAAGGTATATCGCTGGCGTTATGATTCG
AACGGGTTTACGAGATTCTT

Downstream 100 bases:

>100_bases
TCCGCTTCCTGCTGATCCTTGCGCTGTCCCTGTGTCCCATCGCGGCAGCAGCGCAGGACGACGGCACCACGCTGTCGCGC
CTTCTGGAAGATCAACTGTC

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 597

Protein sequence:

>598_residues
MGGRQIIASALVACALAGAGQAQDIQLSAPGVDEDLTDRLRASSLLLQETEEVRTAQDLIAAARADYGRLVAALYDAGHF
SPVVRIDVDGREAARIPPFGGPRSVNQITIRVEPGPVFQLGTAEIAPLAPDTELPGEFRPGGAVTTGLLRDTASAAIGAW
RDNGYATAEVSDQQITARNGDAVLDVRVRVEPGQIVQFGTLVPRGQERMRVERILAIAGLPQGETFSPDTLDRVEGRLQD
TGVFSAIALQEGDVGPDGVMNIEATLVESEPRRFGFGAEVSTDDGASLSAYWLHRNLFGGAERLRIEGEISGIGSEGLNV
EDVEGIDASVGLRYSRPATFTPDTTAYLELGLNYFDDPAFTFTNVGAEVGVEHRFDRRLTGTLGLAVDYYDIQTPFGNDQ
IIVLSTPLGMTWDRRDDPLDARELFYLNGTATPFITDQGGAGSRVYVDGRVYLGFGETRASRIAVRGQLGSVFGGELSDI
PPDFLFFSGGVGTVRGQEYQSLGAIQNGIDDGGRSFAGLSTEFRQDIGETNFGLVAFADAGFIGTDATGGEGDWHAGAGL
GVRYDTPFGPIRVDLATPVRGEGVGEDVYIYIGIGHAF

Sequences:

>Translated_598_residues
MGGRQIIASALVACALAGAGQAQDIQLSAPGVDEDLTDRLRASSLLLQETEEVRTAQDLIAAARADYGRLVAALYDAGHF
SPVVRIDVDGREAARIPPFGGPRSVNQITIRVEPGPVFQLGTAEIAPLAPDTELPGEFRPGGAVTTGLLRDTASAAIGAW
RDNGYATAEVSDQQITARNGDAVLDVRVRVEPGQIVQFGTLVPRGQERMRVERILAIAGLPQGETFSPDTLDRVEGRLQD
TGVFSAIALQEGDVGPDGVMNIEATLVESEPRRFGFGAEVSTDDGASLSAYWLHRNLFGGAERLRIEGEISGIGSEGLNV
EDVEGIDASVGLRYSRPATFTPDTTAYLELGLNYFDDPAFTFTNVGAEVGVEHRFDRRLTGTLGLAVDYYDIQTPFGNDQ
IIVLSTPLGMTWDRRDDPLDARELFYLNGTATPFITDQGGAGSRVYVDGRVYLGFGETRASRIAVRGQLGSVFGGELSDI
PPDFLFFSGGVGTVRGQEYQSLGAIQNGIDDGGRSFAGLSTEFRQDIGETNFGLVAFADAGFIGTDATGGEGDWHAGAGL
GVRYDTPFGPIRVDLATPVRGEGVGEDVYIYIGIGHAF
>Mature_597_residues
GGRQIIASALVACALAGAGQAQDIQLSAPGVDEDLTDRLRASSLLLQETEEVRTAQDLIAAARADYGRLVAALYDAGHFS
PVVRIDVDGREAARIPPFGGPRSVNQITIRVEPGPVFQLGTAEIAPLAPDTELPGEFRPGGAVTTGLLRDTASAAIGAWR
DNGYATAEVSDQQITARNGDAVLDVRVRVEPGQIVQFGTLVPRGQERMRVERILAIAGLPQGETFSPDTLDRVEGRLQDT
GVFSAIALQEGDVGPDGVMNIEATLVESEPRRFGFGAEVSTDDGASLSAYWLHRNLFGGAERLRIEGEISGIGSEGLNVE
DVEGIDASVGLRYSRPATFTPDTTAYLELGLNYFDDPAFTFTNVGAEVGVEHRFDRRLTGTLGLAVDYYDIQTPFGNDQI
IVLSTPLGMTWDRRDDPLDARELFYLNGTATPFITDQGGAGSRVYVDGRVYLGFGETRASRIAVRGQLGSVFGGELSDIP
PDFLFFSGGVGTVRGQEYQSLGAIQNGIDDGGRSFAGLSTEFRQDIGETNFGLVAFADAGFIGTDATGGEGDWHAGAGLG
VRYDTPFGPIRVDLATPVRGEGVGEDVYIYIGIGHAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=135, Percent_Identity=34.0740740740741, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 63566; Mature: 63435

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGRQIIASALVACALAGAGQAQDIQLSAPGVDEDLTDRLRASSLLLQETEEVRTAQDLI
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARADYGRLVAALYDAGHFSPVVRIDVDGREAARIPPFGGPRSVNQITIRVEPGPVFQL
HHHHCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEE
GTAEIAPLAPDTELPGEFRPGGAVTTGLLRDTASAAIGAWRDNGYATAEVSDQQITARNG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCEEEEEECCCEEEECCC
DAVLDVRVRVEPGQIVQFGTLVPRGQERMRVERILAIAGLPQGETFSPDTLDRVEGRLQD
CEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHC
TGVFSAIALQEGDVGPDGVMNIEATLVESEPRRFGFGAEVSTDDGASLSAYWLHRNLFGG
CCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEECCCCCCCEEEEEEHHHHCCC
AERLRIEGEISGIGSEGLNVEDVEGIDASVGLRYSRPATFTPDTTAYLELGLNYFDDPAF
CEEEEEEEEEECCCCCCCCCCCCCCCCHHCCEEECCCCCCCCCCEEEEEECCCCCCCCCE
TFTNVGAEVGVEHRFDRRLTGTLGLAVDYYDIQTPFGNDQIIVLSTPLGMTWDRRDDPLD
EEECCCHHCCCCHHHCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCC
ARELFYLNGTATPFITDQGGAGSRVYVDGRVYLGFGETRASRIAVRGQLGSVFGGELSDI
CEEEEEECCCCCEEEECCCCCCCEEEECCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC
PPDFLFFSGGVGTVRGQEYQSLGAIQNGIDDGGRSFAGLSTEFRQDIGETNFGLVAFADA
CCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCHHHHHHCCCCCCCEEEEECC
GFIGTDATGGEGDWHAGAGLGVRYDTPFGPIRVDLATPVRGEGVGEDVYIYIGIGHAF
CEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure 
GGRQIIASALVACALAGAGQAQDIQLSAPGVDEDLTDRLRASSLLLQETEEVRTAQDLI
CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARADYGRLVAALYDAGHFSPVVRIDVDGREAARIPPFGGPRSVNQITIRVEPGPVFQL
HHHHCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEE
GTAEIAPLAPDTELPGEFRPGGAVTTGLLRDTASAAIGAWRDNGYATAEVSDQQITARNG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCEEEEEECCCEEEECCC
DAVLDVRVRVEPGQIVQFGTLVPRGQERMRVERILAIAGLPQGETFSPDTLDRVEGRLQD
CEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHC
TGVFSAIALQEGDVGPDGVMNIEATLVESEPRRFGFGAEVSTDDGASLSAYWLHRNLFGG
CCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEECCCCCCCEEEEEEHHHHCCC
AERLRIEGEISGIGSEGLNVEDVEGIDASVGLRYSRPATFTPDTTAYLELGLNYFDDPAF
CEEEEEEEEEECCCCCCCCCCCCCCCCHHCCEEECCCCCCCCCCEEEEEECCCCCCCCCE
TFTNVGAEVGVEHRFDRRLTGTLGLAVDYYDIQTPFGNDQIIVLSTPLGMTWDRRDDPLD
EEECCCHHCCCCHHHCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCC
ARELFYLNGTATPFITDQGGAGSRVYVDGRVYLGFGETRASRIAVRGQLGSVFGGELSDI
CEEEEEECCCCCEEEECCCCCCCEEEECCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC
PPDFLFFSGGVGTVRGQEYQSLGAIQNGIDDGGRSFAGLSTEFRQDIGETNFGLVAFADA
CCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCHHHHHHCCCCCCCEEEEECC
GFIGTDATGGEGDWHAGAGLGVRYDTPFGPIRVDLATPVRGEGVGEDVYIYIGIGHAF
CEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]