| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052726
Identifier: 89052726
GI number: 89052726
Start: 229906
End: 230286
Strand: Direct
Name: 89052726
Synonym: Jann_0235
Alternate gene names: NA
Gene position: 229906-230286 (Clockwise)
Preceding gene: 89052725
Following gene: 89052727
Centisome position: 5.32
GC content: 53.54
Gene sequence:
>381_bases ATGAAATCTAAAGTGGAAAAACTGTCGGATAATGGCAAAGGCGAACTGGCCAACGCGGGCACCGCACAATGCTATGACTT TAACAGCGAAGCGGCGAAAACGATGGGCCTATTTGACGCCTTCTGGCTGCGAACACACCCCAAGGAAGAGCGCTTCTTTC GTGAAGCGATGGAAGGCGAAAGCCCGCTACTCGATCACCTCGCTCAAGTCGGGAAGGCGGATTGCCTTTGGATAATCGTA TCTCGCGGCCCAGACGGGGGAACCACTGTTAACCCGATGTTTGAGATGGCCGGGGTGAAGATAACGCTATCAGTTGCGAC CGAGGTGATTAACGAAACACCATTTGCAAACCAATCCGACGCCCTGTGTGTCCGGCAGTAG
Upstream 100 bases:
>100_bases AGCTACGAACTAGGCAAAAATGGGGTAAAATGATACCGTAATACTCATCACCCTGCGCAGGCTGGGCTTTGAAATCTAGC TCCCTTGGAGGGCCATAGTC
Downstream 100 bases:
>100_bases CCCTAGGAAGGTATTGAAATGACGACCGAAGCCCAGCGCCGTGCAATAGAGCAAGCAGAACAGCGCCTAGCCCAATCGGG CACCACTCCCACTCAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKSKVEKLSDNGKGELANAGTAQCYDFNSEAAKTMGLFDAFWLRTHPKEERFFREAMEGESPLLDHLAQVGKADCLWIIV SRGPDGGTTVNPMFEMAGVKITLSVATEVINETPFANQSDALCVRQ
Sequences:
>Translated_126_residues MKSKVEKLSDNGKGELANAGTAQCYDFNSEAAKTMGLFDAFWLRTHPKEERFFREAMEGESPLLDHLAQVGKADCLWIIV SRGPDGGTTVNPMFEMAGVKITLSVATEVINETPFANQSDALCVRQ >Mature_126_residues MKSKVEKLSDNGKGELANAGTAQCYDFNSEAAKTMGLFDAFWLRTHPKEERFFREAMEGESPLLDHLAQVGKADCLWIIV SRGPDGGTTVNPMFEMAGVKITLSVATEVINETPFANQSDALCVRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13829; Mature: 13829
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKVEKLSDNGKGELANAGTAQCYDFNSEAAKTMGLFDAFWLRTHPKEERFFREAMEGE CCCHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC SPLLDHLAQVGKADCLWIIVSRGPDGGTTVNPMFEMAGVKITLSVATEVINETPFANQSD CHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHCCCEEEHHHHHHHHHCCCCCCCCC ALCVRQ CEEECC >Mature Secondary Structure MKSKVEKLSDNGKGELANAGTAQCYDFNSEAAKTMGLFDAFWLRTHPKEERFFREAMEGE CCCHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC SPLLDHLAQVGKADCLWIIVSRGPDGGTTVNPMFEMAGVKITLSVATEVINETPFANQSD CHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHCCCEEEHHHHHHHHHCCCCCCCCC ALCVRQ CEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA