Click here to switch to the map view.

The map label for this gene is 89052718

Identifier: 89052718

GI number: 89052718

Start: 221796

End: 222392

Strand: Reverse

Name: 89052718

Synonym: Jann_0227

Alternate gene names: NA

Gene position: 222392-221796 (Counterclockwise)

Preceding gene: 89052719

Following gene: 89052717

Centisome position: 5.15

GC content: 57.79

Gene sequence:

>597_bases
GTGGCCCGTGATAACCTTTATTCCAAAGCTGTGATGTGGGTGAAAATCATCCTTCCCCTTGTGGCGCTTGGACTTTTGTC
ATCGATCTTTCTTCTGGCAAATGCGCCTGACCCGGATGACGCGTTGCCCTACGCTGACGTCGATATTGAACAGATCACCC
GGCGGCAGACCGTCACTGAACCGCGCTTTGCGGGCATTCTGGGCGACGGGCAGGAAATCGTGTTGATCGCAGACACAGTG
ACTGCGGATGTCGATCAGACCGACCAGTTTCTGGCCCGCATGGTTGACGGGCGCATGGATATGGGCCTGACGGAGGAGTT
GATGATCCGCGCGGACTTAGGTGACATCGACATGGCCGCGCAATTGGCGACGCTGACCGATGATGTGGTTCTGCACACCA
CGGACGGCTACCGCATGGTGAGTGAGGTCGTGATCATGGCGCTTGACGTGGTGAACATGCGCTCTCCGGTGCCGGTCCAT
GTCACAGGCCCGGGCATTGATGTGACAGCCGACACCATGGAATTGACCGGCCCGGATGGAGAGACAATCCTGCATTTCAA
CGGCTCCGTCAGGGTGCTATACGACCCGCAAAGCTGA

Upstream 100 bases:

>100_bases
ACTGGCGCAGGCGTGTTTTGACTTTCTGCCCATGCGTGCGAAGCTGGATCTGGCCGGTTGGCCGGAAATGGACATTTTCA
GTCATTAAGGGACCCGTTCC

Downstream 100 bases:

>100_bases
AGGGGCGCCCATGCACCGTATCCTTGCCCTTTTGGGCGTTATCCTCTGTCTCACCACACCGCTCTCGGCGCAGGTCAACA
TTGGCTTTGGTGGGGTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MARDNLYSKAVMWVKIILPLVALGLLSSIFLLANAPDPDDALPYADVDIEQITRRQTVTEPRFAGILGDGQEIVLIADTV
TADVDQTDQFLARMVDGRMDMGLTEELMIRADLGDIDMAAQLATLTDDVVLHTTDGYRMVSEVVIMALDVVNMRSPVPVH
VTGPGIDVTADTMELTGPDGETILHFNGSVRVLYDPQS

Sequences:

>Translated_198_residues
MARDNLYSKAVMWVKIILPLVALGLLSSIFLLANAPDPDDALPYADVDIEQITRRQTVTEPRFAGILGDGQEIVLIADTV
TADVDQTDQFLARMVDGRMDMGLTEELMIRADLGDIDMAAQLATLTDDVVLHTTDGYRMVSEVVIMALDVVNMRSPVPVH
VTGPGIDVTADTMELTGPDGETILHFNGSVRVLYDPQS
>Mature_197_residues
ARDNLYSKAVMWVKIILPLVALGLLSSIFLLANAPDPDDALPYADVDIEQITRRQTVTEPRFAGILGDGQEIVLIADTVT
ADVDQTDQFLARMVDGRMDMGLTEELMIRADLGDIDMAAQLATLTDDVVLHTTDGYRMVSEVVIMALDVVNMRSPVPVHV
TGPGIDVTADTMELTGPDGETILHFNGSVRVLYDPQS

Specific function: Unknown

COG id: COG5375

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21557; Mature: 21426

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDNLYSKAVMWVKIILPLVALGLLSSIFLLANAPDPDDALPYADVDIEQITRRQTVTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHCCCC
PRFAGILGDGQEIVLIADTVTADVDQTDQFLARMVDGRMDMGLTEELMIRADLGDIDMAA
CCCEEEECCCCEEEEEEECEECCCCHHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHH
QLATLTDDVVLHTTDGYRMVSEVVIMALDVVNMRSPVPVHVTGPGIDVTADTMELTGPDG
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECEEEEECCCC
ETILHFNGSVRVLYDPQS
CEEEEECCEEEEEECCCC
>Mature Secondary Structure 
ARDNLYSKAVMWVKIILPLVALGLLSSIFLLANAPDPDDALPYADVDIEQITRRQTVTE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHCCCC
PRFAGILGDGQEIVLIADTVTADVDQTDQFLARMVDGRMDMGLTEELMIRADLGDIDMAA
CCCEEEECCCCEEEEEEECEECCCCHHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHH
QLATLTDDVVLHTTDGYRMVSEVVIMALDVVNMRSPVPVHVTGPGIDVTADTMELTGPDG
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECEEEEECCCC
ETILHFNGSVRVLYDPQS
CEEEEECCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA