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The map label for this gene is yibD [C]

Identifier: 89052708

GI number: 89052708

Start: 211628

End: 212857

Strand: Direct

Name: yibD [C]

Synonym: Jann_0217

Alternate gene names: 89052708

Gene position: 211628-212857 (Clockwise)

Preceding gene: 89052707

Following gene: 89052709

Centisome position: 4.9

GC content: 63.9

Gene sequence:

>1230_bases
TTGAGCGCGCTCCGCCTCAGTGTTGTCGTCGTCAGCGTTGGGCGGCCAGAGGCCCTGCGTCGGTGTCTGATCAGCCTGTC
GCAGCAGGCCAAGGCCGGATGTGAGGTGATTGTTGTTGCCGATACGGTTGGGCAAGCCGCTGTCCGCACCCTGCCTGTCG
CTGGCGCGTTGAGGTTGTTGCCGCAGCGCCAGCCCAACATCTCCGCCGCGCGCAACGCCGGAATTGCCGCAGCTGGCGGG
GATGTCATCGCGTTCATCGACGATGATGCCGTGGCTGAGCCGATTTGGTCCCATGCAATCCTGACTGCGTTTGACGACCC
GGACATCGCCGCGGTGACGGGGCCAGTGCTGGGGCGGAACGGCATTTCCCTTCAATGGGGTCCGATGGCGGCAAACGGGC
TCGCGCAGGACGCAGAAGTAGACCCTGACACCCCGGTCAGAGACGGTTTCGTGCGGAAACTACAAGGGACGAACATGGCC
GTTCGCCGCCCGGTTCTGGAGGACATCGGCGGATTTGACGAGGCGCTGCATTTCTATCTGGATGACACGGATATGGCTTT
GCGGCTGGGACGGGCCGGGTTGCGGTCCGCCTGGGTCCCCCGCGCGGTCGTGCATCACGGGTTTGACGCGAGTGTCCGCA
GGTCCCCGACCCGCGTCCCGCTGAGCTTGTTCGACATCGGTGCCTCCAGCGCTGTCTTCCTGCGCAAACACGCGCCGGAT
GATCGTTATGCGGAGGCCCTGCACGCGCTGGAGGCGGCCCAAAGTACCCGGCTGATGCGGCTGGTCCAGAGGCGGAAGAT
CGACCCCGACCAGATGCGCACGCTGTTGGAGAGCCTTCGGGAGGGGATCAAGGACGGACAGAGCCGTGATAGCCATCAGC
CGGAAATCGGCTCTGTTGCGCAGTATTTCGAGCCCTTTCAAACCATCGACCCGCCCGCGCATCAGGTCCTGTCCGGGCGG
TCCTTCCAGCTTGCCCGTCTAAGGGCCCAGGTCGAACAGCTTGTCGCGCAGGGGCAGCCCGTCAGCCTGTTTGCCTTGGA
ACCGACGCCGCGAAAACACAAGGTGCGGTTCACTGACGGCGGATGGTGGGAGCAGACCGGAGGGCTTTTCGGCCCGTCTG
ACCGCAGCGGTCCACGCCTTCAAATCACCTCGTTTCGTGCCCGTATCGCGGCGGAGGTCAGTCGTATTTCTGCCACGCGC
TGTATAGAGCCTGACAGGAAGAAATATTGA

Upstream 100 bases:

>100_bases
TATGCGTTGAGGTGGAGGCCCATGGCGCAAAGTTCTGGGAATTGAACAACCCCGAAGATATCCCCCGGATCGAGGCCATG
CTGCGAGACATGGGCGCGCC

Downstream 100 bases:

>100_bases
TTATTTCCCTGCGAACCATATTTTGTTAGGGACCTTGCAACAATAAGAGGCAGCGTATCCACAAAAGCGGTACGGCGCAT
AAGAGGCATGGCATGAAGAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSALRLSVVVVSVGRPEALRRCLISLSQQAKAGCEVIVVADTVGQAAVRTLPVAGALRLLPQRQPNISAARNAGIAAAGG
DVIAFIDDDAVAEPIWSHAILTAFDDPDIAAVTGPVLGRNGISLQWGPMAANGLAQDAEVDPDTPVRDGFVRKLQGTNMA
VRRPVLEDIGGFDEALHFYLDDTDMALRLGRAGLRSAWVPRAVVHHGFDASVRRSPTRVPLSLFDIGASSAVFLRKHAPD
DRYAEALHALEAAQSTRLMRLVQRRKIDPDQMRTLLESLREGIKDGQSRDSHQPEIGSVAQYFEPFQTIDPPAHQVLSGR
SFQLARLRAQVEQLVAQGQPVSLFALEPTPRKHKVRFTDGGWWEQTGGLFGPSDRSGPRLQITSFRARIAAEVSRISATR
CIEPDRKKY

Sequences:

>Translated_409_residues
MSALRLSVVVVSVGRPEALRRCLISLSQQAKAGCEVIVVADTVGQAAVRTLPVAGALRLLPQRQPNISAARNAGIAAAGG
DVIAFIDDDAVAEPIWSHAILTAFDDPDIAAVTGPVLGRNGISLQWGPMAANGLAQDAEVDPDTPVRDGFVRKLQGTNMA
VRRPVLEDIGGFDEALHFYLDDTDMALRLGRAGLRSAWVPRAVVHHGFDASVRRSPTRVPLSLFDIGASSAVFLRKHAPD
DRYAEALHALEAAQSTRLMRLVQRRKIDPDQMRTLLESLREGIKDGQSRDSHQPEIGSVAQYFEPFQTIDPPAHQVLSGR
SFQLARLRAQVEQLVAQGQPVSLFALEPTPRKHKVRFTDGGWWEQTGGLFGPSDRSGPRLQITSFRARIAAEVSRISATR
CIEPDRKKY
>Mature_408_residues
SALRLSVVVVSVGRPEALRRCLISLSQQAKAGCEVIVVADTVGQAAVRTLPVAGALRLLPQRQPNISAARNAGIAAAGGD
VIAFIDDDAVAEPIWSHAILTAFDDPDIAAVTGPVLGRNGISLQWGPMAANGLAQDAEVDPDTPVRDGFVRKLQGTNMAV
RRPVLEDIGGFDEALHFYLDDTDMALRLGRAGLRSAWVPRAVVHHGFDASVRRSPTRVPLSLFDIGASSAVFLRKHAPDD
RYAEALHALEAAQSTRLMRLVQRRKIDPDQMRTLLESLREGIKDGQSRDSHQPEIGSVAQYFEPFQTIDPPAHQVLSGRS
FQLARLRAQVEQLVAQGQPVSLFALEPTPRKHKVRFTDGGWWEQTGGLFGPSDRSGPRLQITSFRARIAAEVSRISATRC
IEPDRKKY

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44569; Mature: 44438

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALRLSVVVVSVGRPEALRRCLISLSQQAKAGCEVIVVADTVGQAAVRTLPVAGALRLL
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCHHHHHHHC
PQRQPNISAARNAGIAAAGGDVIAFIDDDAVAEPIWSHAILTAFDDPDIAAVTGPVLGRN
CCCCCCCHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHEEEECCCCCCCEEECCCCCCC
GISLQWGPMAANGLAQDAEVDPDTPVRDGFVRKLQGTNMAVRRPVLEDIGGFDEALHFYL
CCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHEEEE
DDTDMALRLGRAGLRSAWVPRAVVHHGFDASVRRSPTRVPLSLFDIGASSAVFLRKHAPD
CCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHCCCCCCCCEEEEECCCCCEEEEECCCCC
DRYAEALHALEAAQSTRLMRLVQRRKIDPDQMRTLLESLREGIKDGQSRDSHQPEIGSVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
QYFEPFQTIDPPAHQVLSGRSFQLARLRAQVEQLVAQGQPVSLFALEPTPRKHKVRFTDG
HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCC
GWWEQTGGLFGPSDRSGPRLQITSFRARIAAEVSRISATRCIEPDRKKY
CCCHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure 
SALRLSVVVVSVGRPEALRRCLISLSQQAKAGCEVIVVADTVGQAAVRTLPVAGALRLL
CCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCHHHHHHHC
PQRQPNISAARNAGIAAAGGDVIAFIDDDAVAEPIWSHAILTAFDDPDIAAVTGPVLGRN
CCCCCCCHHHHCCCEEECCCCEEEEECCCHHHHHHHHHHEEEECCCCCCCEEECCCCCCC
GISLQWGPMAANGLAQDAEVDPDTPVRDGFVRKLQGTNMAVRRPVLEDIGGFDEALHFYL
CCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHEEEE
DDTDMALRLGRAGLRSAWVPRAVVHHGFDASVRRSPTRVPLSLFDIGASSAVFLRKHAPD
CCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHCCCCCCCCEEEEECCCCCEEEEECCCCC
DRYAEALHALEAAQSTRLMRLVQRRKIDPDQMRTLLESLREGIKDGQSRDSHQPEIGSVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
QYFEPFQTIDPPAHQVLSGRSFQLARLRAQVEQLVAQGQPVSLFALEPTPRKHKVRFTDG
HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCC
GWWEQTGGLFGPSDRSGPRLQITSFRARIAAEVSRISATRCIEPDRKKY
CCCHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA