| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is dnaJ
Identifier: 89052702
GI number: 89052702
Start: 205138
End: 206295
Strand: Reverse
Name: dnaJ
Synonym: Jann_0211
Alternate gene names: 89052702
Gene position: 206295-205138 (Counterclockwise)
Preceding gene: 89052703
Following gene: 89052700
Centisome position: 4.78
GC content: 62.18
Gene sequence:
>1158_bases ATGGCAAAACGCGATTATTATGAGGTGCTTGGCGTCTCTAAAGGCGCGAGCGCCGATGAAATCAAGAAGGGCTTCCGCAC CAAGGCGAAAGAACTTCACCCCGACCGCAACGCCGATAACCCAGAAGCCGAATCCCAGTTCAAAGAAGCGAATGAGGCCT ACGACGTCCTGAAAGACGCCGACAAGAAAGCCGCCTACGACCGCTTTGGGCATGCGGCCTTTGATGGTGGCATGGCAGGT GGACCACGCGGTGGCGGAGGTCAGGGCCAGGGCGATTTCGCATCCGCGTTCTCGGACGTGTTCGAAGACCTCTTTGGCGA TTTCATGGGCGGTCAACGGGGCCGTCCAGGTGGCGCACGAACCCAGGCCACGCGCGGCTCGGACCTGCGCTACAACCTGT CGATCACTCTCGAAGACGCCTACAACGGGCTGTCCAAACAGATCACCGTGCCTTCCTCGGTCGCGTGCAGTTCCTGCGAC GGCACCGGATCGGAAGCAGGCGCAGAGCCGACCAGCTGCCCCACCTGTTCCGGCATGGGCAAGGTGCGCGCTCAACAGGG GTTCTTCACGGTTGAACGGACCTGTCCCACCTGCAACGGCATGGGTCAGATCGTCAAAAATCCGTGCCGCACGTGTGGCG GGGCCGGGCGTCAGGAAAAGGATCGCGCGCTCAGCGTCAATATCCCGGCGGGGGTTGAGACCGGCACGCGCATCCGGCTG TCGGGCGAAGGCGAAGCGGGTCTGCGTGGCGGACCGGCCGGTGATCTCTACATATTTGTGGAGGTCCAGGACCACGCCCT GTTTCAGCGCGATGGCATGGATCTCTTCTGCCGCGTCCCCGTCTCCATGGTCTCCGCCGCGTTGGGGGGCGAGATCGAAG TGCCCAGCATCGATGGCGGACGGTCCCGCGTGCGTGTCCCCGAAGGGTCGCAATCCGGTCGCCAGATGCGTCTGCGTGGC AAAGGCATGCCCGCCCTTCGCGGCCCCGGTTTGGGGGAGATGTATATCGAGTTGATGGTGGAAACGCCCGTGAACCTCAC TGGGGACCAGGCCGAGCTGCTGCGTCAGTTTGAAGAGAGTTGCAAAAAGACCAACAACCCCAACGCATCCGGCTTCTTCG ACAAAGTCAAAAGCTTCTGGGACAAGGTCCGCGACTGA
Upstream 100 bases:
>100_bases GACCTCGACGACGACCGCAAGCGCGGTTAATCGCGACTGATCCACTAGGCCAGCCCGTTGAATAAGCGGGCTGGCCGATG TGTTTCCGAAAGGGACAAAG
Downstream 100 bases:
>100_bases TCCGTAGGGCGGGAAATGTCCCACCACTGAACCGCCATATAACCGGCCCTCGGATCACCCCGGGGGGCCGGTTTTTTTGT GGCGAACAGAATTCGGCCCA
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MAKRDYYEVLGVSKGASADEIKKGFRTKAKELHPDRNADNPEAESQFKEANEAYDVLKDADKKAAYDRFGHAAFDGGMAG GPRGGGGQGQGDFASAFSDVFEDLFGDFMGGQRGRPGGARTQATRGSDLRYNLSITLEDAYNGLSKQITVPSSVACSSCD GTGSEAGAEPTSCPTCSGMGKVRAQQGFFTVERTCPTCNGMGQIVKNPCRTCGGAGRQEKDRALSVNIPAGVETGTRIRL SGEGEAGLRGGPAGDLYIFVEVQDHALFQRDGMDLFCRVPVSMVSAALGGEIEVPSIDGGRSRVRVPEGSQSGRQMRLRG KGMPALRGPGLGEMYIELMVETPVNLTGDQAELLRQFEESCKKTNNPNASGFFDKVKSFWDKVRD
Sequences:
>Translated_385_residues MAKRDYYEVLGVSKGASADEIKKGFRTKAKELHPDRNADNPEAESQFKEANEAYDVLKDADKKAAYDRFGHAAFDGGMAG GPRGGGGQGQGDFASAFSDVFEDLFGDFMGGQRGRPGGARTQATRGSDLRYNLSITLEDAYNGLSKQITVPSSVACSSCD GTGSEAGAEPTSCPTCSGMGKVRAQQGFFTVERTCPTCNGMGQIVKNPCRTCGGAGRQEKDRALSVNIPAGVETGTRIRL SGEGEAGLRGGPAGDLYIFVEVQDHALFQRDGMDLFCRVPVSMVSAALGGEIEVPSIDGGRSRVRVPEGSQSGRQMRLRG KGMPALRGPGLGEMYIELMVETPVNLTGDQAELLRQFEESCKKTNNPNASGFFDKVKSFWDKVRD >Mature_384_residues AKRDYYEVLGVSKGASADEIKKGFRTKAKELHPDRNADNPEAESQFKEANEAYDVLKDADKKAAYDRFGHAAFDGGMAGG PRGGGGQGQGDFASAFSDVFEDLFGDFMGGQRGRPGGARTQATRGSDLRYNLSITLEDAYNGLSKQITVPSSVACSSCDG TGSEAGAEPTSCPTCSGMGKVRAQQGFFTVERTCPTCNGMGQIVKNPCRTCGGAGRQEKDRALSVNIPAGVETGTRIRLS GEGEAGLRGGPAGDLYIFVEVQDHALFQRDGMDLFCRVPVSMVSAALGGEIEVPSIDGGRSRVRVPEGSQSGRQMRLRGK GMPALRGPGLGEMYIELMVETPVNLTGDQAELLRQFEESCKKTNNPNASGFFDKVKSFWDKVRD
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain
Homologues:
Organism=Homo sapiens, GI205360838, Length=361, Percent_Identity=32.6869806094183, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI205360840, Length=361, Percent_Identity=32.6869806094183, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI5031741, Length=355, Percent_Identity=32.112676056338, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI4504511, Length=368, Percent_Identity=32.3369565217391, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI194328760, Length=352, Percent_Identity=30.9659090909091, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI194328758, Length=352, Percent_Identity=30.9659090909091, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI7706495, Length=363, Percent_Identity=29.2011019283747, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI194328762, Length=315, Percent_Identity=28.8888888888889, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI6631085, Length=387, Percent_Identity=28.4237726098191, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI56549115, Length=364, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI201862518, Length=364, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI201862587, Length=364, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI5453690, Length=391, Percent_Identity=24.8081841432225, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI39204547, Length=370, Percent_Identity=23.2432432432432, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI9558755, Length=121, Percent_Identity=42.1487603305785, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI27151736, Length=105, Percent_Identity=46.6666666666667, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI88501736, Length=105, Percent_Identity=46.6666666666667, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI47777312, Length=114, Percent_Identity=44.7368421052632, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI23503241, Length=108, Percent_Identity=44.4444444444444, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI194306642, Length=110, Percent_Identity=43.6363636363636, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI194306640, Length=110, Percent_Identity=43.6363636363636, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI24308127, Length=90, Percent_Identity=41.1111111111111, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=51.5625, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI29126218, Length=64, Percent_Identity=50, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=53.030303030303, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=53.030303030303, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI21553335, Length=107, Percent_Identity=38.3177570093458, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI157671935, Length=62, Percent_Identity=51.6129032258064, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI68077168, Length=113, Percent_Identity=37.1681415929204, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI68077166, Length=113, Percent_Identity=37.1681415929204, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI22749377, Length=109, Percent_Identity=37.6146788990826, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=45.5882352941176, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI8922563, Length=68, Percent_Identity=44.1176470588235, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1786197, Length=387, Percent_Identity=49.3540051679587, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI1787235, Length=360, Percent_Identity=29.7222222222222, Blast_Score=157, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17553096, Length=363, Percent_Identity=33.8842975206612, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17553098, Length=363, Percent_Identity=33.8842975206612, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI212645553, Length=359, Percent_Identity=30.3621169916435, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI17534355, Length=388, Percent_Identity=30.1546391752577, Blast_Score=130, Evalue=9e-31, Organism=Caenorhabditis elegans, GI17507263, Length=358, Percent_Identity=30.4469273743017, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17563890, Length=226, Percent_Identity=29.2035398230088, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI115532378, Length=95, Percent_Identity=40, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538236, Length=113, Percent_Identity=40.7079646017699, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115532476, Length=68, Percent_Identity=50, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554644, Length=67, Percent_Identity=43.2835820895522, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=362, Percent_Identity=32.5966850828729, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6323870, Length=360, Percent_Identity=32.7777777777778, Blast_Score=142, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6321094, Length=382, Percent_Identity=32.7225130890052, Blast_Score=123, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6323119, Length=401, Percent_Identity=26.6832917705736, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6324252, Length=424, Percent_Identity=23.8207547169811, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6322194, Length=106, Percent_Identity=38.6792452830189, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320888, Length=136, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323813, Length=127, Percent_Identity=36.2204724409449, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI45552813, Length=364, Percent_Identity=29.9450549450549, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI45549272, Length=364, Percent_Identity=29.9450549450549, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI45552811, Length=364, Percent_Identity=29.9450549450549, Blast_Score=161, Evalue=6e-40, Organism=Drosophila melanogaster, GI24646562, Length=361, Percent_Identity=31.5789473684211, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24646560, Length=361, Percent_Identity=31.5789473684211, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24646558, Length=361, Percent_Identity=31.5789473684211, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24646556, Length=361, Percent_Identity=31.5789473684211, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI21357547, Length=361, Percent_Identity=31.5789473684211, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI20129487, Length=354, Percent_Identity=30.225988700565, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24584014, Length=354, Percent_Identity=30.225988700565, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI19920464, Length=360, Percent_Identity=30, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI85726398, Length=360, Percent_Identity=26.9444444444444, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI28574949, Length=362, Percent_Identity=25.414364640884, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24658562, Length=354, Percent_Identity=26.8361581920904, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24658555, Length=354, Percent_Identity=26.8361581920904, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI18858081, Length=354, Percent_Identity=26.5536723163842, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24668492, Length=67, Percent_Identity=46.2686567164179, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24584630, Length=70, Percent_Identity=50, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI17648033, Length=70, Percent_Identity=50, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24668523, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737735, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654066, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654070, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654068, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654072, Length=67, Percent_Identity=47.7611940298507, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574723, Length=64, Percent_Identity=46.875, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=50, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24645889, Length=77, Percent_Identity=41.5584415584416, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DNAJ_JANSC (Q28VY4)
Other databases:
- EMBL: CP000264 - RefSeq: YP_508153.1 - ProteinModelPortal: Q28VY4 - STRING: Q28VY4 - GeneID: 3932648 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_0211 - eggNOG: COG0484 - HOGENOM: HBG635315 - OMA: IHITIET - PhylomeDB: Q28VY4 - ProtClustDB: PRK10767 - BioCyc: JSP290400:JANN_0211-MONOMER - GO: GO:0005737 - HAMAP: MF_01152 - InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 - Gene3D: G3DSA:1.10.287.110 - Gene3D: G3DSA:2.10.230.10 - PANTHER: PTHR11821 - PRINTS: PR00625 - SMART: SM00271 - TIGRFAMs: TIGR02349
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG; SSF46565 DnaJ_N; SSF49493 HSP40_DnaJ_pep; SSF57938 HSP_DnaJ_cys-rich
EC number: NA
Molecular weight: Translated: 41093; Mature: 40962
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00636 DNAJ_1; PS50076 DNAJ_2; PS51188 ZF_CR; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRDYYEVLGVSKGASADEIKKGFRTKAKELHPDRNADNPEAESQFKEANEAYDVLKDA CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DKKAAYDRFGHAAFDGGMAGGPRGGGGQGQGDFASAFSDVFEDLFGDFMGGQRGRPGGAR HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TQATRGSDLRYNLSITLEDAYNGLSKQITVPSSVACSSCDGTGSEAGAEPTSCPTCSGMG CCCCCCCCEEEEEEEEEHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KVRAQQGFFTVERTCPTCNGMGQIVKNPCRTCGGAGRQEKDRALSVNIPAGVETGTRIRL HHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEE SGEGEAGLRGGPAGDLYIFVEVQDHALFQRDGMDLFCRVPVSMVSAALGGEIEVPSIDGG CCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCEEEECCHHHHHHHHCCCEECCCCCCC RSRVRVPEGSQSGRQMRLRGKGMPALRGPGLGEMYIELMVETPVNLTGDQAELLRQFEES CCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CKKTNNPNASGFFDKVKSFWDKVRD HHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AKRDYYEVLGVSKGASADEIKKGFRTKAKELHPDRNADNPEAESQFKEANEAYDVLKDA CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DKKAAYDRFGHAAFDGGMAGGPRGGGGQGQGDFASAFSDVFEDLFGDFMGGQRGRPGGAR HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TQATRGSDLRYNLSITLEDAYNGLSKQITVPSSVACSSCDGTGSEAGAEPTSCPTCSGMG CCCCCCCCEEEEEEEEEHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KVRAQQGFFTVERTCPTCNGMGQIVKNPCRTCGGAGRQEKDRALSVNIPAGVETGTRIRL HHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEE SGEGEAGLRGGPAGDLYIFVEVQDHALFQRDGMDLFCRVPVSMVSAALGGEIEVPSIDGG CCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCEEEECCHHHHHHHHCCCEECCCCCCC RSRVRVPEGSQSGRQMRLRGKGMPALRGPGLGEMYIELMVETPVNLTGDQAELLRQFEES CCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CKKTNNPNASGFFDKVKSFWDKVRD HHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA