Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052682

Identifier: 89052682

GI number: 89052682

Start: 183871

End: 184578

Strand: Reverse

Name: 89052682

Synonym: Jann_0191

Alternate gene names: NA

Gene position: 184578-183871 (Counterclockwise)

Preceding gene: 89052685

Following gene: 89052681

Centisome position: 4.27

GC content: 59.04

Gene sequence:

>708_bases
ATGTGCCTCACGAAGACGTTTTTAACCCACACGCCGCGCAGAGGTGCCATGAACTCCTCCCTTTTGTCCTTGTTGGTGCT
GGCTGGCATCGCGATTTTCCTGATTTTGCGCCTGCGCTCCGTGTTGGGCACGCGCGATGGTTTTGAAAAGCCCCCCGTCG
CACCTGGATCCAGCCGTCGCGATGTGCGTCGTGATTTTGAGGTGATCGAAGGGGGCCCCGACGATGACATCCTCGACCAT
GTCGATGACGGATCTGACAGCGCCAAGGCTCTGGCCGCGATGAAAATGGCGGAACCTGGCTTCCGTGTTGGCGAATTTCT
TGGCGGCGCGCGTCAGGCGTATGAGATGATCCTGATGGCGTTTGAGCGGGGCGATGTCGACGGTCTGCGTCCGTTCCTGG
CCGACGACGTGTTGGAAACGTTTGAGACAGTGATCGACCAGCGCAATGAACAGGGCCTGTCCATCGAGGCGGAGTTCGTT
GGTGTGCGAGAGATTACCTTGCAAGAGGCCACGTTTGACCGGTCCGCCGGCGTCGGGGAAGTAACGGTGCGGTTCATTGG
TGAGCTTACTAGCGTTGTGCGCAATGCCGACGGCGAGATCATCGAAGGGGACGCAACAGAGATCAAACGCCAACGCGATG
TCTGGACCTTTGCCCGTAAAATGGGCGCCGATGATCCGAACTGGGCCCTGGTGGCAACCGACGGATGA

Upstream 100 bases:

>100_bases
CGTTGCGCGGCGCCGTTGCCGCAATCCGGGTGAGCCAATCGTTCACGCGCACGCGCGATGGAGCACGCGCGATGGACTTG
ATACCACCCCTGCCCTACAT

Downstream 100 bases:

>100_bases
TCCATGGGACGGCTTGCGGTTGTCTTTGCCCTATTGATGACGGCGAGTGTCGCTGTGGCCGATGAGCCCGTGCAACTTCT
TGGATTTGATGATCTGGACG

Product: import inner membrane translocase subunit Tim44

Products: NA

Alternate protein names: Translocase Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase; Tim44 Domain-Containing Protein; Membrane Associated Transporter Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Transporter Protein; Tim44-Like Domain Superfamily; Tim44-Like Domain Containing Protein; Tim44 Family Protein; Translocase; Tim44-Like Domain Family; Membrane Translocase Subunit Tim; Import Inner Membrane Translocase; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRRDVRRDFEVIEGGPDDDILDH
VDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMAFERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFV
GVREITLQEATFDRSAGVGEVTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG

Sequences:

>Translated_235_residues
MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRRDVRRDFEVIEGGPDDDILDH
VDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMAFERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFV
GVREITLQEATFDRSAGVGEVTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG
>Mature_235_residues
MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRRDVRRDFEVIEGGPDDDILDH
VDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMAFERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFV
GVREITLQEATFDRSAGVGEVTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG

Specific function: Unknown

COG id: COG4395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25764; Mature: 25764

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRR
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
DVRRDFEVIEGGPDDDILDHVDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMA
HHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFVGVREITLQEATFDRSAGVGE
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCHH
VTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG
HHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRR
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
DVRRDFEVIEGGPDDDILDHVDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMA
HHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFVGVREITLQEATFDRSAGVGE
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCHH
VTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG
HHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA