| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052682
Identifier: 89052682
GI number: 89052682
Start: 183871
End: 184578
Strand: Reverse
Name: 89052682
Synonym: Jann_0191
Alternate gene names: NA
Gene position: 184578-183871 (Counterclockwise)
Preceding gene: 89052685
Following gene: 89052681
Centisome position: 4.27
GC content: 59.04
Gene sequence:
>708_bases ATGTGCCTCACGAAGACGTTTTTAACCCACACGCCGCGCAGAGGTGCCATGAACTCCTCCCTTTTGTCCTTGTTGGTGCT GGCTGGCATCGCGATTTTCCTGATTTTGCGCCTGCGCTCCGTGTTGGGCACGCGCGATGGTTTTGAAAAGCCCCCCGTCG CACCTGGATCCAGCCGTCGCGATGTGCGTCGTGATTTTGAGGTGATCGAAGGGGGCCCCGACGATGACATCCTCGACCAT GTCGATGACGGATCTGACAGCGCCAAGGCTCTGGCCGCGATGAAAATGGCGGAACCTGGCTTCCGTGTTGGCGAATTTCT TGGCGGCGCGCGTCAGGCGTATGAGATGATCCTGATGGCGTTTGAGCGGGGCGATGTCGACGGTCTGCGTCCGTTCCTGG CCGACGACGTGTTGGAAACGTTTGAGACAGTGATCGACCAGCGCAATGAACAGGGCCTGTCCATCGAGGCGGAGTTCGTT GGTGTGCGAGAGATTACCTTGCAAGAGGCCACGTTTGACCGGTCCGCCGGCGTCGGGGAAGTAACGGTGCGGTTCATTGG TGAGCTTACTAGCGTTGTGCGCAATGCCGACGGCGAGATCATCGAAGGGGACGCAACAGAGATCAAACGCCAACGCGATG TCTGGACCTTTGCCCGTAAAATGGGCGCCGATGATCCGAACTGGGCCCTGGTGGCAACCGACGGATGA
Upstream 100 bases:
>100_bases CGTTGCGCGGCGCCGTTGCCGCAATCCGGGTGAGCCAATCGTTCACGCGCACGCGCGATGGAGCACGCGCGATGGACTTG ATACCACCCCTGCCCTACAT
Downstream 100 bases:
>100_bases TCCATGGGACGGCTTGCGGTTGTCTTTGCCCTATTGATGACGGCGAGTGTCGCTGTGGCCGATGAGCCCGTGCAACTTCT TGGATTTGATGATCTGGACG
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Translocase Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase; Tim44 Domain-Containing Protein; Membrane Associated Transporter Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Transporter Protein; Tim44-Like Domain Superfamily; Tim44-Like Domain Containing Protein; Tim44 Family Protein; Translocase; Tim44-Like Domain Family; Membrane Translocase Subunit Tim; Import Inner Membrane Translocase; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRRDVRRDFEVIEGGPDDDILDH VDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMAFERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFV GVREITLQEATFDRSAGVGEVTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG
Sequences:
>Translated_235_residues MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRRDVRRDFEVIEGGPDDDILDH VDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMAFERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFV GVREITLQEATFDRSAGVGEVTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG >Mature_235_residues MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRRDVRRDFEVIEGGPDDDILDH VDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMAFERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFV GVREITLQEATFDRSAGVGEVTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25764; Mature: 25764
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRR CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DVRRDFEVIEGGPDDDILDHVDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMA HHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFVGVREITLQEATFDRSAGVGE HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCHH VTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG HHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MCLTKTFLTHTPRRGAMNSSLLSLLVLAGIAIFLILRLRSVLGTRDGFEKPPVAPGSSRR CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DVRRDFEVIEGGPDDDILDHVDDGSDSAKALAAMKMAEPGFRVGEFLGGARQAYEMILMA HHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FERGDVDGLRPFLADDVLETFETVIDQRNEQGLSIEAEFVGVREITLQEATFDRSAGVGE HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCCCCCHH VTVRFIGELTSVVRNADGEIIEGDATEIKRQRDVWTFARKMGADDPNWALVATDG HHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA