| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is pepA [H]
Identifier: 89052597
GI number: 89052597
Start: 96570
End: 97940
Strand: Reverse
Name: pepA [H]
Synonym: Jann_0106
Alternate gene names: 89052597
Gene position: 97940-96570 (Counterclockwise)
Preceding gene: 89052598
Following gene: 89052596
Centisome position: 2.27
GC content: 64.19
Gene sequence:
>1371_bases ATGCCGATGCAATTTGCCGGGGCGGAGCAGGACGCTCTGCCAATTTTTCTGGTCCGTGCGGGAGACGATGTGGGGGCGCT TGCGCCATCCCATGCCGCCTGGGCCGAGGCCAATGGATTCACGGGCCGGTTGGGTCAGGCGCTGGTCTTGCCGGGGGACG GTTTGGCGGGCGCTTTGGTTGGAATGGGGCAGCCATCCGACCGGCGGCGCAAACGGTTTGCCGTGGGGGCCGCGATCGCG GGTTTGCCCGAGGCCACCTACGAGATTACCAACATGCCCGATGCGGGGCCCGAGGCCGATGAAATCGCCCTGGGGTATCT GCTGTCGACGTATCGGTTCGAGCGTTATCGCAAGCAATCTGGTCCCAAGGCTCGGTTGCTTGCGCCGCTCGGCGTGAACG CCGAACAGTTGGAGCGGATCGCCAAGGCGGAAGGTCTGATCCGCGATCTGATCAACACACCCGCCGAAGATATGGGCCCC GATGCGCTGGAAGCGGTAGTTCGCACGCTGGGGGCCGAGTTTGGCGCAGATGTCTCCGTCATCGCGGGCGACGCGCTGCT GGAGCAGAATTTTCCGCTGATCCACACCGTCGGACGGGCCGCCGCGAAAGCCCCGCGTCTGATCGAAATGACCTGGGGCG CAAGCGGTCCCGCATTAACGCTGGTCGGCAAGGGCGTGTGCTTCGATACCGGCGGTCTGAACCTGAAACCCGGCGCGCCG ATGGGGATCATGAAGAAGGATATGGGCGGGTCGGCCAATGTCCTGGGCCTGGCGCGGATGATCATGGCCAGTGCCATGGA TGTGCAGCTGCGCGTGTTGATCCCCGCCGTTGAAAACAACGTGGCGGGCAATTCCTTCCGGCCCGGTGATATCTTCACCG CGCGCAACGGGATGACGGTTGAAATCAACAACACCGATGCGGAGGGGCGTCTTGTGCTGGCCGATGCGCTGGCGCTGGCG TCTGAAACGCCCCCCGATCTGCTGATATGTATGGCGACGCTGACCGGAGCCGCCCGCGTTGCCGTTGGCCCTGATCTTGC GCCATTCTTCACCGATGATGATGGGTTTGCGACCGCGTTGAGTGCGGCAAGCGCGCGCGTTGCGGACCCGGTCTGGCGTC TGCCGTTCCATGATGCCTATGAGCCGATGATCGAGCCGGGTATCGCTGATCTCGACAATGCACCCGCTGGCGGTATGGCG GGGTCGATCACAGCGGCGCTGTTCCTGCGACGCTTCGCGCCCGTGCCCCGCTTCGCGCATTTTGACATTTACGGCTGGCA GCGCACCACTGCGCCTGCCCGTCCCAAGGGTGGCGTGGGCCAAGGTATCCGCGCGATCTTTGACGCATTGCCCGAGGTTC TTTCCCGATGA
Upstream 100 bases:
>100_bases TCGATCCACGCCGTCTGGGATCTGGAGGATCTTTCGGTCTGATCTGACTTGCAGAGCAGGTGAGGAACGCTAGGCTGGCG CGAAATCAATAGGTGCGCCA
Downstream 100 bases:
>100_bases CCGACCCCCGCACCACCGCATTCAACGGCCGTGTCGCCCATGCATCGCTGAAAGGCGAGATCGAGGCCGAGCGGTATTCG GAAGGCCGCTGGATGATGGT
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MPMQFAGAEQDALPIFLVRAGDDVGALAPSHAAWAEANGFTGRLGQALVLPGDGLAGALVGMGQPSDRRRKRFAVGAAIA GLPEATYEITNMPDAGPEADEIALGYLLSTYRFERYRKQSGPKARLLAPLGVNAEQLERIAKAEGLIRDLINTPAEDMGP DALEAVVRTLGAEFGADVSVIAGDALLEQNFPLIHTVGRAAAKAPRLIEMTWGASGPALTLVGKGVCFDTGGLNLKPGAP MGIMKKDMGGSANVLGLARMIMASAMDVQLRVLIPAVENNVAGNSFRPGDIFTARNGMTVEINNTDAEGRLVLADALALA SETPPDLLICMATLTGAARVAVGPDLAPFFTDDDGFATALSAASARVADPVWRLPFHDAYEPMIEPGIADLDNAPAGGMA GSITAALFLRRFAPVPRFAHFDIYGWQRTTAPARPKGGVGQGIRAIFDALPEVLSR
Sequences:
>Translated_456_residues MPMQFAGAEQDALPIFLVRAGDDVGALAPSHAAWAEANGFTGRLGQALVLPGDGLAGALVGMGQPSDRRRKRFAVGAAIA GLPEATYEITNMPDAGPEADEIALGYLLSTYRFERYRKQSGPKARLLAPLGVNAEQLERIAKAEGLIRDLINTPAEDMGP DALEAVVRTLGAEFGADVSVIAGDALLEQNFPLIHTVGRAAAKAPRLIEMTWGASGPALTLVGKGVCFDTGGLNLKPGAP MGIMKKDMGGSANVLGLARMIMASAMDVQLRVLIPAVENNVAGNSFRPGDIFTARNGMTVEINNTDAEGRLVLADALALA SETPPDLLICMATLTGAARVAVGPDLAPFFTDDDGFATALSAASARVADPVWRLPFHDAYEPMIEPGIADLDNAPAGGMA GSITAALFLRRFAPVPRFAHFDIYGWQRTTAPARPKGGVGQGIRAIFDALPEVLSR >Mature_455_residues PMQFAGAEQDALPIFLVRAGDDVGALAPSHAAWAEANGFTGRLGQALVLPGDGLAGALVGMGQPSDRRRKRFAVGAAIAG LPEATYEITNMPDAGPEADEIALGYLLSTYRFERYRKQSGPKARLLAPLGVNAEQLERIAKAEGLIRDLINTPAEDMGPD ALEAVVRTLGAEFGADVSVIAGDALLEQNFPLIHTVGRAAAKAPRLIEMTWGASGPALTLVGKGVCFDTGGLNLKPGAPM GIMKKDMGGSANVLGLARMIMASAMDVQLRVLIPAVENNVAGNSFRPGDIFTARNGMTVEINNTDAEGRLVLADALALAS ETPPDLLICMATLTGAARVAVGPDLAPFFTDDDGFATALSAASARVADPVWRLPFHDAYEPMIEPGIADLDNAPAGGMAG SITAALFLRRFAPVPRFAHFDIYGWQRTTAPARPKGGVGQGIRAIFDALPEVLSR
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=416, Percent_Identity=30.5288461538462, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI47155554, Length=293, Percent_Identity=34.8122866894198, Blast_Score=135, Evalue=7e-32, Organism=Escherichia coli, GI87082123, Length=316, Percent_Identity=36.7088607594937, Blast_Score=194, Evalue=8e-51, Organism=Escherichia coli, GI1790710, Length=301, Percent_Identity=35.8803986710963, Blast_Score=166, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17556903, Length=283, Percent_Identity=36.3957597173145, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17565172, Length=224, Percent_Identity=30.8035714285714, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI21355725, Length=370, Percent_Identity=30.8108108108108, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24661038, Length=360, Percent_Identity=30.5555555555556, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI21357381, Length=280, Percent_Identity=36.0714285714286, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI221379063, Length=280, Percent_Identity=35.3571428571429, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI221379062, Length=280, Percent_Identity=35.3571428571429, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24662227, Length=291, Percent_Identity=28.8659793814433, Blast_Score=125, Evalue=8e-29, Organism=Drosophila melanogaster, GI20129969, Length=349, Percent_Identity=29.2263610315186, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI161077148, Length=410, Percent_Identity=28.0487804878049, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI20130057, Length=410, Percent_Identity=28.0487804878049, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI21355645, Length=341, Percent_Identity=27.2727272727273, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24662223, Length=341, Percent_Identity=27.2727272727273, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI19922386, Length=291, Percent_Identity=27.4914089347079, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI20129963, Length=410, Percent_Identity=25.609756097561, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24646701, Length=233, Percent_Identity=31.7596566523605, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI24646703, Length=233, Percent_Identity=31.7596566523605, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI21358201, Length=233, Percent_Identity=31.7596566523605, Blast_Score=99, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 47703; Mature: 47572
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMQFAGAEQDALPIFLVRAGDDVGALAPSHAAWAEANGFTGRLGQALVLPGDGLAGALV CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCHHHHHH GMGQPSDRRRKRFAVGAAIAGLPEATYEITNMPDAGPEADEIALGYLLSTYRFERYRKQS CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GPKARLLAPLGVNAEQLERIAKAEGLIRDLINTPAEDMGPDALEAVVRTLGAEFGADVSV CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCEEE IAGDALLEQNFPLIHTVGRAAAKAPRLIEMTWGASGPALTLVGKGVCFDTGGLNLKPGAP EECCHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCEEEECCCCCCCCCCC MGIMKKDMGGSANVLGLARMIMASAMDVQLRVLIPAVENNVAGNSFRPGDIFTARNGMTV CCHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEHHCCCCCCCCCCCCEEEECCCEEE EINNTDAEGRLVLADALALASETPPDLLICMATLTGAARVAVGPDLAPFFTDDDGFATAL EECCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCEECCCCHHHHH SAASARVADPVWRLPFHDAYEPMIEPGIADLDNAPAGGMAGSITAALFLRRFAPVPRFAH HHHHHHHCCCCEECCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE FDIYGWQRTTAPARPKGGVGQGIRAIFDALPEVLSR EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PMQFAGAEQDALPIFLVRAGDDVGALAPSHAAWAEANGFTGRLGQALVLPGDGLAGALV CCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCHHHHHH GMGQPSDRRRKRFAVGAAIAGLPEATYEITNMPDAGPEADEIALGYLLSTYRFERYRKQS CCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GPKARLLAPLGVNAEQLERIAKAEGLIRDLINTPAEDMGPDALEAVVRTLGAEFGADVSV CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCEEE IAGDALLEQNFPLIHTVGRAAAKAPRLIEMTWGASGPALTLVGKGVCFDTGGLNLKPGAP EECCHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCEEEECCCCCCCCCCC MGIMKKDMGGSANVLGLARMIMASAMDVQLRVLIPAVENNVAGNSFRPGDIFTARNGMTV CCHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEHHCCCCCCCCCCCCEEEECCCEEE EINNTDAEGRLVLADALALASETPPDLLICMATLTGAARVAVGPDLAPFFTDDDGFATAL EECCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCEECCCCHHHHH SAASARVADPVWRLPFHDAYEPMIEPGIADLDNAPAGGMAGSITAALFLRRFAPVPRFAH HHHHHHHCCCCEECCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE FDIYGWQRTTAPARPKGGVGQGIRAIFDALPEVLSR EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]