| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052534
Identifier: 89052534
GI number: 89052534
Start: 41286
End: 41561
Strand: Reverse
Name: 89052534
Synonym: Jann_0043
Alternate gene names: NA
Gene position: 41561-41286 (Counterclockwise)
Preceding gene: 89052541
Following gene: 89052533
Centisome position: 0.96
GC content: 63.41
Gene sequence:
>276_bases ATGCGATTTACGCTTCTGATCACCGGCGCGCTAGTTTGCGCCGGGTGCACTCCTGCTGCCGCGCCGTCCGGGCGCGCCGC CGTTCCCGAAACCTGTGAGGCCGCACGGCTGCAAACGCTTGTGGGTCAAAATGTCCGTACGATGGGCGCGTTGCCCAATG TTCATCCACTGCAATTGATCGGTCCGGGGGCAGAGCCTGTCCAGGCACTCAGGCCGGATCGCACCCACGCGTATTTCGAC GCAGATGGTGTCGTCGTATCGGTCGCTTGCGGGTAG
Upstream 100 bases:
>100_bases ACGGCTGCACGTGTGCGCATTTTTATGTCTTCTCCCAGAGACTTGATTTCACCCGAGACTGGGACAAACTCGGGCACAAC GCAACGGAAGGATATCCACC
Downstream 100 bases:
>100_bases GGGATTCCAGCGGTGATCGGTGCGGCGCGGTAGGGTAGGCTTGTGTCATATTCAAAGCCCTTCTCATTCCGGAGTCCCCT TCAGATGTCCTTTTCAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MRFTLLITGALVCAGCTPAAAPSGRAAVPETCEAARLQTLVGQNVRTMGALPNVHPLQLIGPGAEPVQALRPDRTHAYFD ADGVVVSVACG
Sequences:
>Translated_91_residues MRFTLLITGALVCAGCTPAAAPSGRAAVPETCEAARLQTLVGQNVRTMGALPNVHPLQLIGPGAEPVQALRPDRTHAYFD ADGVVVSVACG >Mature_91_residues MRFTLLITGALVCAGCTPAAAPSGRAAVPETCEAARLQTLVGQNVRTMGALPNVHPLQLIGPGAEPVQALRPDRTHAYFD ADGVVVSVACG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9310; Mature: 9310
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFTLLITGALVCAGCTPAAAPSGRAAVPETCEAARLQTLVGQNVRTMGALPNVHPLQLI CEEEEEEECHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEE GPGAEPVQALRPDRTHAYFDADGVVVSVACG CCCCCCHHHCCCCCCEEEECCCCEEEEEECC >Mature Secondary Structure MRFTLLITGALVCAGCTPAAAPSGRAAVPETCEAARLQTLVGQNVRTMGALPNVHPLQLI CEEEEEEECHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEE GPGAEPVQALRPDRTHAYFDADGVVVSVACG CCCCCCHHHCCCCCCEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA