| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052499
Identifier: 89052499
GI number: 89052499
Start: 8575
End: 8931
Strand: Direct
Name: 89052499
Synonym: Jann_0008
Alternate gene names: NA
Gene position: 8575-8931 (Clockwise)
Preceding gene: 89052498
Following gene: 89052500
Centisome position: 0.2
GC content: 64.71
Gene sequence:
>357_bases ATGTTTAAGAAAACCTTTACCGCCGCCGCCCTCGTTCTTGCCACCGCCGCTGTGCCCGCCGCAGCTCAGCAGATCAGCTT CGGCATCTCCGCTGGCAACCAGCAGGAGCGGGACGCCATCACCGGTGCCCTCGCCCTCTACCAGATCGCCAACGGTGGAG ATCCCGTTGAGGTCCTGACTCAGGCCGCCACCGGCTCCGTCGGTGTCATCCACCAGGAAGGCAACGGCCATAACGGCTCG CTGGCCCAGGGTGGCGGAGGCAACGCCGGTGGTCTGTTCCAGTTCGGCAACAACACCAACGCCCACCTGAACCAGACCGG CGGCCAGGGCGACCTCGTCTTCACATACGGCTGGTAA
Upstream 100 bases:
>100_bases CGCTGCCCCACGTCGCTTTAACCCGAATACCTTCCAAGATCTTTTCAATCCTCCTTTTATCCGACCCTTTTCAAACCCCA TTTTCTCAAGGAACACTGCC
Downstream 100 bases:
>100_bases TCCCCGACCAGCCCCACGGTTTGGCCAGTCCGCTGGCCGAAACTCCGGACACCTGATCCATCACCAACCCCCGTTTCCCC CGGTGGATTGGGTGTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MFKKTFTAAALVLATAAVPAAAQQISFGISAGNQQERDAITGALALYQIANGGDPVEVLTQAATGSVGVIHQEGNGHNGS LAQGGGGNAGGLFQFGNNTNAHLNQTGGQGDLVFTYGW
Sequences:
>Translated_118_residues MFKKTFTAAALVLATAAVPAAAQQISFGISAGNQQERDAITGALALYQIANGGDPVEVLTQAATGSVGVIHQEGNGHNGS LAQGGGGNAGGLFQFGNNTNAHLNQTGGQGDLVFTYGW >Mature_118_residues MFKKTFTAAALVLATAAVPAAAQQISFGISAGNQQERDAITGALALYQIANGGDPVEVLTQAATGSVGVIHQEGNGHNGS LAQGGGGNAGGLFQFGNNTNAHLNQTGGQGDLVFTYGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11817; Mature: 11817
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKTFTAAALVLATAAVPAAAQQISFGISAGNQQERDAITGALALYQIANGGDPVEVLT CCCCHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHH QAATGSVGVIHQEGNGHNGSLAQGGGGNAGGLFQFGNNTNAHLNQTGGQGDLVFTYGW HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCEEEEECC >Mature Secondary Structure MFKKTFTAAALVLATAAVPAAAQQISFGISAGNQQERDAITGALALYQIANGGDPVEVLT CCCCHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHH QAATGSVGVIHQEGNGHNGSLAQGGGGNAGGLFQFGNNTNAHLNQTGGQGDLVFTYGW HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA