| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is csgB [C]
Identifier: 89052497
GI number: 89052497
Start: 7558
End: 7992
Strand: Direct
Name: csgB [C]
Synonym: Jann_0006
Alternate gene names: 89052497
Gene position: 7558-7992 (Clockwise)
Preceding gene: 89052496
Following gene: 89052498
Centisome position: 0.18
GC content: 60.0
Gene sequence:
>435_bases ATGAAACTCGCACTTATCAAAACCGCCGCCGTCTCCATCGCTCTGATCGCAACTGTTGGCGCCGCATCGGCCTGCAACAT CGCAACGGCCAACCAGTTTGGCTGGGACAACTCCGCCGGCGTCCAGCAGTTCGGTAACTGCAACAACACTGCCATCGGTC AGAACGGCTGGAACAACACCGCAGCCGGCATCTCCAACGGCTTCGCCAACACGGTTGTGGTTGGTCAGGACGGCGCTTGG AACACTGGCGTTGTTGGTCAGAACGGCTCCTTCAACGCTGGCGCAGTGCAGCAGTCCGGCGCCCTGAACTACGGTGAAGT TGTTCAGAACGGCAACTTCCAGACCGGCGCTGTGATCCAGTCCGGCGTGGGTAACACCGGTGTCCTGAACCAGACCGGTA CGGGCAACACCGCCCTGATCATCCAGGCCAACTAA
Upstream 100 bases:
>100_bases AGTTCATCGGCTCACAGGGCATAACCCAAACATGAGCTGAACAACACGAACCTGAAACACACACCTAAACCAAAACTTTA TATTTATAGGAATTCACACA
Downstream 100 bases:
>100_bases GTCCGGACCATCCGGGGGCGGGTTTCCCTTAATCCCCTTCGCCCCGCCCCGGGATAAATTGACCCAAGACCTCTCAACCA ACCTCATTTTCAAAGGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNTAAGISNGFANTVVVGQDGAW NTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQSGVGNTGVLNQTGTGNTALIIQAN
Sequences:
>Translated_144_residues MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNTAAGISNGFANTVVVGQDGAW NTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQSGVGNTGVLNQTGTGNTALIIQAN >Mature_144_residues MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNTAAGISNGFANTVVVGQDGAW NTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQSGVGNTGVLNQTGTGNTALIIQAN
Specific function: Curlin Is The Structural Subunit Of The Curli. Curli Are Coiled Surface Structures That Assemble Preferentially At Growth Temperatures Below 37 Degrees Celsius. Curli Can Bind To Fibronectin. The Minor Subunit Is The Nucleation Component Of Curlin Monome
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14275; Mature: 14275
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNT CEEEEEEHHHHHEEEEHHHCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC AAGISNGFANTVVVGQDGAWNTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQ CCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEE SGVGNTGVLNQTGTGNTALIIQAN CCCCCCCCEECCCCCCEEEEEEEC >Mature Secondary Structure MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNT CEEEEEEHHHHHEEEEHHHCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC AAGISNGFANTVVVGQDGAWNTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQ CCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEE SGVGNTGVLNQTGTGNTALIIQAN CCCCCCCCEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA