Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is csgB [C]

Identifier: 89052497

GI number: 89052497

Start: 7558

End: 7992

Strand: Direct

Name: csgB [C]

Synonym: Jann_0006

Alternate gene names: 89052497

Gene position: 7558-7992 (Clockwise)

Preceding gene: 89052496

Following gene: 89052498

Centisome position: 0.18

GC content: 60.0

Gene sequence:

>435_bases
ATGAAACTCGCACTTATCAAAACCGCCGCCGTCTCCATCGCTCTGATCGCAACTGTTGGCGCCGCATCGGCCTGCAACAT
CGCAACGGCCAACCAGTTTGGCTGGGACAACTCCGCCGGCGTCCAGCAGTTCGGTAACTGCAACAACACTGCCATCGGTC
AGAACGGCTGGAACAACACCGCAGCCGGCATCTCCAACGGCTTCGCCAACACGGTTGTGGTTGGTCAGGACGGCGCTTGG
AACACTGGCGTTGTTGGTCAGAACGGCTCCTTCAACGCTGGCGCAGTGCAGCAGTCCGGCGCCCTGAACTACGGTGAAGT
TGTTCAGAACGGCAACTTCCAGACCGGCGCTGTGATCCAGTCCGGCGTGGGTAACACCGGTGTCCTGAACCAGACCGGTA
CGGGCAACACCGCCCTGATCATCCAGGCCAACTAA

Upstream 100 bases:

>100_bases
AGTTCATCGGCTCACAGGGCATAACCCAAACATGAGCTGAACAACACGAACCTGAAACACACACCTAAACCAAAACTTTA
TATTTATAGGAATTCACACA

Downstream 100 bases:

>100_bases
GTCCGGACCATCCGGGGGCGGGTTTCCCTTAATCCCCTTCGCCCCGCCCCGGGATAAATTGACCCAAGACCTCTCAACCA
ACCTCATTTTCAAAGGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNTAAGISNGFANTVVVGQDGAW
NTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQSGVGNTGVLNQTGTGNTALIIQAN

Sequences:

>Translated_144_residues
MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNTAAGISNGFANTVVVGQDGAW
NTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQSGVGNTGVLNQTGTGNTALIIQAN
>Mature_144_residues
MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNTAAGISNGFANTVVVGQDGAW
NTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQSGVGNTGVLNQTGTGNTALIIQAN

Specific function: Curlin Is The Structural Subunit Of The Curli. Curli Are Coiled Surface Structures That Assemble Preferentially At Growth Temperatures Below 37 Degrees Celsius. Curli Can Bind To Fibronectin. The Minor Subunit Is The Nucleation Component Of Curlin Monome

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14275; Mature: 14275

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNT
CEEEEEEHHHHHEEEEHHHCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
AAGISNGFANTVVVGQDGAWNTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQ
CCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEE
SGVGNTGVLNQTGTGNTALIIQAN
CCCCCCCCEECCCCCCEEEEEEEC
>Mature Secondary Structure
MKLALIKTAAVSIALIATVGAASACNIATANQFGWDNSAGVQQFGNCNNTAIGQNGWNNT
CEEEEEEHHHHHEEEEHHHCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
AAGISNGFANTVVVGQDGAWNTGVVGQNGSFNAGAVQQSGALNYGEVVQNGNFQTGAVIQ
CCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEE
SGVGNTGVLNQTGTGNTALIIQAN
CCCCCCCCEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA