| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658520
Identifier: 88658520
GI number: 88658520
Start: 229809
End: 230717
Strand: Direct
Name: 88658520
Synonym: ECH_0247
Alternate gene names: NA
Gene position: 229809-230717 (Clockwise)
Preceding gene: 88658491
Following gene: 88657842
Centisome position: 19.54
GC content: 34.98
Gene sequence:
>909_bases GTGTCTAGTGTTAATCATGGTATATCGTATGTCTTAAATAGTACTACAAGTATAGGAAATGGAAATCTTACAACAACTAC ATTAAGCAATCTGTTTACTCGTGTTTTGGACGATACTGTTAGTAGTACAGTAGAAAATGGGAGTAATACTACAACAGTTT CTTCTGCATTAAATGATACAGTTAGTGATATTGTGAATAGTGCTGTTAGCAGTACAATGGAAAATGGGAGTAGTTCTACA ACAATTTCTTCTATCTTGAATAATACGGTTAGTGATATTGTGAATAGTACTGTTAGCAGTACAATGGAAAATGGGAGTAG TTCTACAACAATTTCTTCTATCTTAAATAATACGGTTAGTGATATTGTGAATAGTGCTGTTAGCAGTACAATGGAAAATG GGGGTGGTTCTACAACAATTTCTTCTGTATTAAATAGTACATTTACTAATATTTTGAATAGTGCTGTTGGTAGTACAGTA GAAGGTAGTGTTGGTAATGCTACAACAATTTTTCCTGTATTAAATAATACGGTTACTAGTAGTACTAGGAATAATAGTCT CCATGATAGTACACTTATTGCAGCATTTATAATGATAATGGGTACATTTCTGTTAATGTTTTCAGTGATGATATGTGTAC GTAGTGTTCAAACCTGTAGAAGCAATATTCGAAGACATAGAGTACAGATGGCATATTTACGAGAGCATGGGGGGGGGGGA CCTCCTGATAATTTGAGTGATGCTGTGATAGCATTAGATGTGATAGGAGAAGTTAGTGTTGTGACTGAAAGTTCAAACGT TGAAAATAGACCTTTTCTGCTGTGTCAGCATGATCATCAAGAAGATCCTGCTGATTCTGCTGAGCAAGTTAGACCTGTGT TTAGGTTACAGGGAATATTCCCTAGGTAA
Upstream 100 bases:
>100_bases CTAAATTTTCATAAAAATTGTGATATAATTAACCTAGTGTGTTATCCATTTTTTATTTATGTTGCTTTTCAATTGGTTAG GGGATGTGTTAATTTCTCTT
Downstream 100 bases:
>100_bases TTTGAATAGAATAGATGTAATACATAATACTCAACTTATGAATGAAAGCCAGAATATTATTTGGCTTGGTACTTCTTATA TATTGTTATGTATATAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSSVNHGISYVLNSTTSIGNGNLTTTTLSNLFTRVLDDTVSSTVENGSNTTTVSSALNDTVSDIVNSAVSSTMENGSSST TISSILNNTVSDIVNSTVSSTMENGSSSTTISSILNNTVSDIVNSAVSSTMENGGGSTTISSVLNSTFTNILNSAVGSTV EGSVGNATTIFPVLNNTVTSSTRNNSLHDSTLIAAFIMIMGTFLLMFSVMICVRSVQTCRSNIRRHRVQMAYLREHGGGG PPDNLSDAVIALDVIGEVSVVTESSNVENRPFLLCQHDHQEDPADSAEQVRPVFRLQGIFPR
Sequences:
>Translated_302_residues MSSVNHGISYVLNSTTSIGNGNLTTTTLSNLFTRVLDDTVSSTVENGSNTTTVSSALNDTVSDIVNSAVSSTMENGSSST TISSILNNTVSDIVNSTVSSTMENGSSSTTISSILNNTVSDIVNSAVSSTMENGGGSTTISSVLNSTFTNILNSAVGSTV EGSVGNATTIFPVLNNTVTSSTRNNSLHDSTLIAAFIMIMGTFLLMFSVMICVRSVQTCRSNIRRHRVQMAYLREHGGGG PPDNLSDAVIALDVIGEVSVVTESSNVENRPFLLCQHDHQEDPADSAEQVRPVFRLQGIFPR >Mature_301_residues SSVNHGISYVLNSTTSIGNGNLTTTTLSNLFTRVLDDTVSSTVENGSNTTTVSSALNDTVSDIVNSAVSSTMENGSSSTT ISSILNNTVSDIVNSTVSSTMENGSSSTTISSILNNTVSDIVNSAVSSTMENGGGSTTISSVLNSTFTNILNSAVGSTVE GSVGNATTIFPVLNNTVTSSTRNNSLHDSTLIAAFIMIMGTFLLMFSVMICVRSVQTCRSNIRRHRVQMAYLREHGGGGP PDNLSDAVIALDVIGEVSVVTESSNVENRPFLLCQHDHQEDPADSAEQVRPVFRLQGIFPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31761; Mature: 31630
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVNHGISYVLNSTTSIGNGNLTTTTLSNLFTRVLDDTVSSTVENGSNTTTVSSALNDT CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VSDIVNSAVSSTMENGSSSTTISSILNNTVSDIVNSTVSSTMENGSSSTTISSILNNTVS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DIVNSAVSSTMENGGGSTTISSVLNSTFTNILNSAVGSTVEGSVGNATTIFPVLNNTVTS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCHHHC STRNNSLHDSTLIAAFIMIMGTFLLMFSVMICVRSVQTCRSNIRRHRVQMAYLREHGGGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PPDNLSDAVIALDVIGEVSVVTESSNVENRPFLLCQHDHQEDPADSAEQVRPVFRLQGIF CCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCC PR CC >Mature Secondary Structure SSVNHGISYVLNSTTSIGNGNLTTTTLSNLFTRVLDDTVSSTVENGSNTTTVSSALNDT CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VSDIVNSAVSSTMENGSSSTTISSILNNTVSDIVNSTVSSTMENGSSSTTISSILNNTVS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DIVNSAVSSTMENGGGSTTISSVLNSTFTNILNSAVGSTVEGSVGNATTIFPVLNNTVTS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCHHHC STRNNSLHDSTLIAAFIMIMGTFLLMFSVMICVRSVQTCRSNIRRHRVQMAYLREHGGGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PPDNLSDAVIALDVIGEVSVVTESSNVENRPFLLCQHDHQEDPADSAEQVRPVFRLQGIF CCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCC PR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA